Prunus avium (sweet cherry): 110756154
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Entry
110756154 CDS
T05161
Name
(RefSeq) ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110756154
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pavi02000
]
110756154
Transporters [BR:
pavi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110756154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
AAA_29
RsgA_GTPase
ABC2_membrane
Motif
Other DBs
NCBI-GeneID:
110756154
NCBI-ProteinID:
XP_021813235
UniProt:
A0A6P5S888
LinkDB
All DBs
Position
Unknown
AA seq
1887 aa
AA seq
DB search
MGTGRRQLKIMLWKNWLLKVRHPFVTCAEILLPTVVMLLLIAIRMRVDTQIHPSQPYIRK
GMFVEVGKGISPNFEQVLELLLNKEEFLAFAPDTEETRSMINIISVKFPLLKNVSRVYKD
EQELETYIGSDLYGTCNQIMNCSNPKIKGAVVFHDQGPQSFDYSIRLNHTWAFSGFPNVK
SIMDTNGPYLNDLELGINTVPTMQYSFSGFLTLQQVLDSFIIFAAQQSDTKNIELPSSLP
SGEPSSLKVPWTSYGPSNIRIVPFPTREYTDDEFQSIIKSVMGVLYLLGFLYPISRLISY
SVFEKEQKIREGLYMMGLEDGIFHLSWFIAYALQFAVSSAIITVCTMDNLFKYSDKTVVF
IYFFFFGLSAIMLSFLISTFFTRAKTAVAVGTLTFLGAFFPYYSVNDEGVPMTLKVVASL
LSPTAFALGSINFADYERAHVGLRWSNIWRASSGVNFLVCLLMMLLDALLYCLIGLYLDK
VLPRENGVRYPWNFIFHKRFWKNPSINKHLNHNSGVEVNSHDSVSKKASFSGKDNVKAAV
EAITFDMKQQELDHRCIKIRNLHKVYGSKKGKCCAVNSLQLTMYENQILALLGHNGAGKS
TTISMLVGLLRPTSGDALVFGKNIITEMEEIRKELGVCPQNDILFPELTVREHLEIFAIL
KGVKEDFVNSAVVDMGDQVGLADKMNTAVNALSGGMKRKLSLGIALIGNSKVIILDEPTS
GMDPYSMRLTWQLIKKIRKGRIVLLTTHSMDEAEVLGDRIAIMANGSLKCCGSSLFLKHK
YGVGYTLTLVKSAPTASVAADIVFRHIPSATCVSEVGTEISFKLPLASSSSFESMFREIE
SCMKRPMSNLETSSGEDYLGIESYGISVTTLEEVFLRVAGCDYVEAACFDKKTDLGIPDS
VICQTNDPVPKKIFHSKKSFGYYKEILGVLFTIVGRACGLIFATVLSFLNFISVQCCCCG
IISRSTFWRHSKALFIKRAISARRDQKTIVFQLVIPAVFLFFGLLFLKLKPHPDQLSVTF
TTSHFNPLLRGGGGGPIPFDLSWPIAKEVAQYVEGGWIQNFKPGAYKFPNAEKALDDAIE
AAGPTLGPVLLSMSEFLMSSFNESYQSRYGAIVMDDQNDDGSLGYTVLHNSSCQHAAPTF
INLMNAAILRLAAHNKNMTIQTRNHPLPMTKSQHLQHHDLDAFSAAVIVSIAFSFIPASF
AVSIVKEREVKAKHQQLISGVSILSYWASTYIWDFISFLFPSSFAIILFYIFGLEQFIGS
GCLLSTVIMFLAYGLAIASTTYCLTFFFSDHSMAQNVVLLVHFFTGLILMVISFIMGLIK
TTSSANSFLKNFFRLSPGFCFADGLASLALLRQDMKNKSSNEAFDWNVTGGSICYLGIES
ICYFLLTLGLEHLPYNKLTLATLKEWWKSTKSTRQGSSSYLEPLLKSSSEVITHDLDEDI
DVKTERTRVLSGSIDNAIIYLQNLWKVYPGGKLHGPKIAVNSLTFSVQEGECFGFLGTNG
AGKTTTLSMLTGEESPTDGTACIFGKDICSNPKAARRHIGFCPQFDALLEFLTVQEHLEL
YATIKGVPDYQIDDVVMEKLVEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILD
EPSTGMDPIAKRFMWEVISRLSTRRGKTAVILTTHSMNEAQALCTRMGIMVGGRLRCIGS
PQHLKTRFGNHLELEVKPFEVSSGDLENLCRVIQERLSYVPSHPRSLLDGFEVCIGATDS
IVAENASVAEISLSREMIIIIGRWLGNEERIKSLISSVPLSDGVIGEQLAEQLVRDGGIP
LPIFSEWWLSNEKFSAIDSFVFSSFPGAIFQGFNGLSAKYQLPYGQGLSLADVFGHLERN
RYKLGIAEYSISQSTLETIFNHFAANS
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atggggaccggacggagacagttgaagattatgctttggaagaattggcttctcaaagtt
cgtcaccctttcgtcacctgcgctgagatattactccccacagtagtaatgttgttgtta
atagctataaggatgcgtgtcgatacacagattcacccatcgcagccgtatatccggaaa
gggatgtttgtggaagtgggcaaaggaatatcacctaactttgaacaagttttggaatta
ctgttgaataaggaagagtttctggcttttgcaccagacactgaagaaacaaggtcaatg
attaacataatatcggttaaatttcccctcctgaagaatgtatctagagtttacaaagat
gaacaggagctggaaacctatataggctcagatctctatggtacctgcaatcaaataatg
aattgctcgaatccaaaaatcaaaggagcagtagtatttcatgaccaaggtccccaatct
tttgattatagcatacgtctcaatcacacatgggctttctcaggatttcctaacgttaaa
tccatcatggacacaaatggtccctaccttaatgacttggaactgggcataaatacggta
ccgacaatgcaatacagcttcagcggtttcttaactctccagcaagttttggattccttt
ataatttttgcggcccagcaatctgacaccaaaaatatagaacttccttcatctttgccc
tctggcgaaccttcctctcttaaagtgccatggacgagttatggtccgtcaaacattcga
atagtcccatttccaactcgtgaatacactgatgatgagttccagtccatcataaaaagt
gtcatgggtgtattgtatcttttgggatttctctacccaatttctcggttgatcagctat
tctgtgtttgagaaggaacagaagataagagaaggtctttatatgatggggctggaagat
gggatattccatctctcatggtttattgcatatgctttgcagtttgcagtttcttctgca
attattacggtttgcactatggataatcttttcaagtacagtgataagacagtggtgttc
atttacttcttcttctttggactaagtgcaattatgctgtcatttttaatctctacattc
ttcacaagagcgaagacagctgttgctgttgggacccttacttttcttggtgcttttttt
ccttactactctgtcaatgatgagggtgtgcctatgacattaaaagtagttgcgtctttg
ctttcaccaacggcctttgctttaggatcaattaactttgctgattatgagcgtgctcat
gttggccttcgttggagcaacatatggcgcgcatcatctggcgtgaattttttggtctgt
ctattgatgatgttgctcgatgcgttgctctactgtttaattggtctgtatctggacaag
gtccttcccagggagaatggagttagatatccatggaacttcattttccacaagcgcttt
tggaaaaatccaagtattaacaaacatctcaatcacaattccggtgtagaagttaatagc
catgacagtgtttccaagaaggcaagcttttctgggaaagataatgttaaagcggctgtt
gaagcgataacatttgatatgaaacaacaagagcttgaccataggtgcatcaagataaga
aatctgcacaaggtatatggcagtaaaaaagggaaatgttgtgctgttaactcattacag
ctcaccatgtatgaaaatcagattcttgcacttctaggacacaatggagctggtaaaagc
acaacgatatcgatgcttgtcggccttcttcgccctacttcaggggatgctttggtgttt
gggaagaatattataaccgaaatggaggagatacggaaggaattaggggtatgccctcaa
aatgatatcctttttccagaattaacggtgagggagcatttggaaatatttgctatattg
aaaggtgtgaaggaagattttgtaaacagcgctgttgttgatatgggtgatcaagtaggt
ttggctgataaaatgaacacggctgtgaatgctctgtctggaggcatgaagaggaaattg
tctcttggaattgcactgataggaaatagtaaggttataattttggatgaaccgactagt
ggaatggatccgtactctatgcgcttgacatggcaattaataaaaaagattagaaagggc
aggatagtattactgaccacacactcaatggatgaagcagaagtacttggagatcgtata
gctatcatggccaatggctctttgaaatgctgcggaagttcccttttcttgaagcataag
tacggggttggttatactctaactttagtgaagtctgcacccactgcctctgttgctgct
gacattgttttccgccatatcccatcagcaacatgtgtgagcgaggttggaactgagatt
tcgtttaagcttcctttggcatcctcgtcgtcctttgaaagtatgtttagggaaattgag
agttgcatgaaaagacccatgtccaacttagaaacaagttctggtgaggactatttgggc
attgaaagttatggtatttctgttacaactttggaggaggtattcctgagggttgcgggg
tgtgactatgttgaagctgcttgttttgacaagaagactgatctagggattcctgattct
gtaatttgtcagactaatgatcctgtgcccaaaaagatctttcactcaaaaaaatctttt
ggatattataaggagattctcggggtcttatttacaatagtgggaagagcttgtggtttg
atttttgctacagttttaagtttcttaaacttcatcagtgtgcaatgttgttgctgtggt
atcatttcaaggtcaacattttggcgacattctaaagcattgttcataaagagggcaata
tctgctcgcagagaccagaaaacaattgttttccagcttgttattcctgcagttttctta
ttttttggtcttctatttctcaagctcaagccacatcctgatcaactgtctgttacattt
acaacttcgcattttaatccactattacgtggtggtggtggtggtccaatcccttttgat
ttatcctggcctattgcaaaggaggttgcacagtatgttgaagggggttggatacaaaac
ttcaaacctggtgcatataaattccctaatgcagagaaggcattggatgatgcaattgag
gcagcagggccaaccctgggacctgttttactttcaatgagcgaatttttaatgtctagc
tttaatgaatcttaccagtcaaggtatggggcaattgtgatggatgatcagaatgatgat
ggaagtttagggtacactgtgctacacaacagttcctgtcagcatgctgccccaacattt
atcaatttaatgaatgctgcaattcttaggcttgctgctcataataagaatatgacaatt
caaacacgtaatcaccctctgccaatgacaaaaagccaacatctgcaacaccatgatttg
gatgcattctctgctgcagttattgttagcattgccttctccttcattcctgcgtcattt
gccgtttctattgtgaaggaacgtgaagtaaaagctaaacaccagcaactgattagtggg
gtttctatactttcatactgggcttctacttacatatgggacttcatcagcttcctattt
ccttcatcttttgcaataattcttttttacatctttggtctggagcagtttattgggagc
ggatgtttattgtcgacagtaatcatgtttttagcgtatggattagcgattgcatcaaca
acatattgccttacatttttcttttctgaccacagtatggctcagaatgtggttctcttg
gtccactttttcacgggactgattcttatggttatctcattcattatggggcttataaag
acaacatcaagtgcaaattcttttctcaagaactttttcagattatctccggggttttgc
tttgctgatggactcgcttcactggctcttctacggcaagatatgaaaaataaatctagc
aatgaggcctttgattggaatgttactggtggctcaatttgctatcttggtattgagagc
atttgctacttccttttgacacttgggcttgaacatttgccttataacaaattgacacta
gccacgctgaaggaatggtggaagagtactaaaagtacccgtcaaggcagttcgagttat
ctagaaccccttctgaaatcttcctcagaagttatcactcatgaccttgatgaagacata
gatgtgaagacggaaagaactagggtactttcaggttccattgacaatgccataatctac
ttgcagaatctttggaaggtgtatcctggaggaaagcttcatggtccaaaaatagcagta
aattcattgactttttcagttcaagaaggagaatgttttggtttcttaggaacaaatgga
gctggaaagaccacaactctgtcaatgctgactggagaggaatctccaactgatgggact
gcttgtatatttggcaaggatatatgctctaatcccaaggctgctcgtcgacatattggg
ttttgcccacagttcgatgctttgttagaatttttaactgttcaagagcatcttgagctt
tatgccacaataaagggagtaccagattaccagatagatgatgttgtaatggaaaagtta
gtggagtttgacttgttaaagcatgccaacaaaccatcattttccctcagtgggggaaac
aagcgtaaattatctgttgcaattgcgatgatcggagatcctcctatagtcattctagat
gagccatcaactggtatggatccaattgccaaaagattcatgtgggaagtgatatctcgt
ctctcaaccagacgaggaaagacagcagtaatacttactactcatagtatgaatgaagct
caagctctttgcacccgtatgggaataatggttggaggccgattaagatgcattggtagt
ccccagcatttgaaaacacgatttggaaatcatcttgagctagaggttaaaccttttgaa
gtcagctctggggacttggaaaatctttgccgagttattcaagaaaggctttcatatgtt
ccttctcatcctaggagcttacttgatggcttcgaagtttgcattggggccactgactcc
attgtggctgaaaatgcatcagtggcagagattagcttgtcacgggaaatgataatcatt
attggacgatggcttggcaatgaagaaagaataaagtcgcttatatcttcagtgccactt
tctgatggcgtgattggtgaacagttagctgagcagttggttcgagatggcggaatacct
ttgccaatattttctgagtggtggttgtccaatgaaaagttttcagcaattgattcattt
gtcttctcatcatttcccggtgcaatattccaaggcttcaatggcctgagtgctaaatat
cagttgccatacggacagggcctctcacttgcagatgtctttggacacctcgaacggaac
agatataaacttggaattgcagaatacagtattagccagtccactttggaaaccatattc
aaccattttgcagcaaactcatga
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integrated database retrieval system
