KEGG   Prunus avium (sweet cherry): 110756282
Entry
110756282         CDS       T05161                                 
Name
(RefSeq) protein RAE1-like isoform X1
  KO
K14298  mRNA export factor
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110756282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110756282
   03036 Chromosome and associated proteins [BR:pavi03036]
    110756282
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110756282
Chromosome and associated proteins [BR:pavi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110756282
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 110756282
NCBI-ProteinID: XP_021813384
UniProt: A0A6P5SBX7
LinkDB
Position
Unknown
AA seq 346 aa
MSKFMAAPNANLNSNSNPNPNPNPNNSFEVAQPPDDSISSLSFSPKSNILVATSWDNQVR
CWEIHQSGTNIVSQPKAAISHDHPVLCSTWKEDGTTVFSGGCDKQVKMWALGGQPVTVAM
HDAPIKEIAWIPEMSLLVTGSLDKTMKYWDVRQPNPVHTQQLPERCYALSVRYPLMVVGT
ADRNLIVFDLQNPQYQTRCVAAFPDHQGFLVGSIEGRVGVQHLDEKQNDKNFTFKCHREG
TRIYSVNSLNFHPVHHTFTTAGSDGSFTFWDKDSKQRLKEMSRCNQPIPCSTFNNDGSIF
AYAVCYDWGKGAEKHNPATAKNYIFLHVPQEAEVKRKPQVNTGGKR
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgtcgaagttcatggctgctccaaatgcaaatttaaattcgaattcaaatccaaatcca
aatccaaatccaaacaactcctttgaggtcgctcaacctccagacgactccatatcaagc
ctaagtttcagtcccaagagcaacattctggtcgccacctcctgggacaaccaggtgcga
tgctgggagatacaccagagcggaaccaatattgtcagtcagccaaaggcagcgatatcc
catgaccatccggttttgtgctcaacttggaaagaggatggaacaactgtgttctctgga
ggttgcgacaagcaagtgaagatgtgggctttgggtggccaaccagtaacggttgccatg
catgatgcacccattaaagagattgcttggatccctgagatgagcctcttagtcacagga
agcttggacaagactatgaagtattgggatgtgaggcagccaaatccagtgcatacacag
caactaccagagcgctgttatgctctatcagtgagataccctctaatggttgttggcact
gcagacagaaatctgattgtttttgacttgcagaacccacagtatcaaacaaggtgtgtt
gctgcatttcccgatcatcaaggattcttggttggctctattgaagggagggttggtgta
caacatctggatgaaaaacaaaatgataaaaactttacctttaagtgccatagagagggc
accaggatatactcagtcaactctctgaacttccatccagtgcatcacacatttactact
gctggttctgatggttctttcactttttgggataaggatagcaaacagagactaaaggaa
atgtcaaggtgcaatcaacctataccttgcagtacgttcaacaatgatggttccatattt
gcatatgcggtttgctatgattggggcaagggtgcagaaaaacataatccagctaccgca
aagaactacattttcctccatgtgccacaggaagccgaggttaaaaggaaaccacaagtc
aacactggtggaaaaaggtga

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