Prunus avium (sweet cherry): 110756282
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Entry
110756282 CDS
T05161
Name
(RefSeq) protein RAE1-like isoform X1
KO
K14298
mRNA export factor
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110756282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110756282
03036 Chromosome and associated proteins [BR:
pavi03036
]
110756282
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110756282
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110756282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
110756282
NCBI-ProteinID:
XP_021813384
UniProt:
A0A6P5SBX7
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MSKFMAAPNANLNSNSNPNPNPNPNNSFEVAQPPDDSISSLSFSPKSNILVATSWDNQVR
CWEIHQSGTNIVSQPKAAISHDHPVLCSTWKEDGTTVFSGGCDKQVKMWALGGQPVTVAM
HDAPIKEIAWIPEMSLLVTGSLDKTMKYWDVRQPNPVHTQQLPERCYALSVRYPLMVVGT
ADRNLIVFDLQNPQYQTRCVAAFPDHQGFLVGSIEGRVGVQHLDEKQNDKNFTFKCHREG
TRIYSVNSLNFHPVHHTFTTAGSDGSFTFWDKDSKQRLKEMSRCNQPIPCSTFNNDGSIF
AYAVCYDWGKGAEKHNPATAKNYIFLHVPQEAEVKRKPQVNTGGKR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagttcatggctgctccaaatgcaaatttaaattcgaattcaaatccaaatcca
aatccaaatccaaacaactcctttgaggtcgctcaacctccagacgactccatatcaagc
ctaagtttcagtcccaagagcaacattctggtcgccacctcctgggacaaccaggtgcga
tgctgggagatacaccagagcggaaccaatattgtcagtcagccaaaggcagcgatatcc
catgaccatccggttttgtgctcaacttggaaagaggatggaacaactgtgttctctgga
ggttgcgacaagcaagtgaagatgtgggctttgggtggccaaccagtaacggttgccatg
catgatgcacccattaaagagattgcttggatccctgagatgagcctcttagtcacagga
agcttggacaagactatgaagtattgggatgtgaggcagccaaatccagtgcatacacag
caactaccagagcgctgttatgctctatcagtgagataccctctaatggttgttggcact
gcagacagaaatctgattgtttttgacttgcagaacccacagtatcaaacaaggtgtgtt
gctgcatttcccgatcatcaaggattcttggttggctctattgaagggagggttggtgta
caacatctggatgaaaaacaaaatgataaaaactttacctttaagtgccatagagagggc
accaggatatactcagtcaactctctgaacttccatccagtgcatcacacatttactact
gctggttctgatggttctttcactttttgggataaggatagcaaacagagactaaaggaa
atgtcaaggtgcaatcaacctataccttgcagtacgttcaacaatgatggttccatattt
gcatatgcggtttgctatgattggggcaagggtgcagaaaaacataatccagctaccgca
aagaactacattttcctccatgtgccacaggaagccgaggttaaaaggaaaccacaagtc
aacactggtggaaaaaggtga
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