Prunus avium (sweet cherry): 110756292
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Entry
110756292 CDS
T05161
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110756292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110756292
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110756292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
110756292
NCBI-ProteinID:
XP_021813393
UniProt:
A0A6P5SHY6
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MDYNAPVAKRTRLSEEKYWRELWEKKAGKRKLRDGSDKKGKSRKGSEAWDCVSVDDSEEN
EEATVSPSTGGKDKKKGGKRKSAEGSKKQRSGCDDSDECEDPSVEIISESSFGKQDNDSL
GFDSVESAGSNGKKSNSVAVDMENFFPVEVEDSDDEVVYLGEGKVGGFGCLSSERSDACE
DAASDGTTEDAASDGSDKSWKSSSSEDSISHASGESDDEAFEPENSESSVFSESSNSCGE
EGHDDEREVTKRSGKPGKGKSVEEKKGQDIDASEIAKGSGKAEKGKSVEIGVRRKRRVGL
DMSVDADDDIDSNKDDPIHSAQEFNSVAKRTRSRVSPRSEKKRIESGTVNDNEDSSSGYD
NDNEDVDDANCSGPRTRCHEKKTGSDDDRRNYESDKTYGGSPETERSKWNDAQRVCKKNR
RDIGNLTNRRSMWAKKDCNVLKILVDSIYEKGEGTLKGSVSFGDEGHKDERNQPESEMTT
LPLKFSFGEQSTVPKKSECDPEEKELWDDLEFALRASEIDSSDSNVVESQDSLPIADEVE
TVASLCRRGVHQLILDEEIGLRCKFCSYLDQEIKYILPDFIDCPYGRFGTRGSETDNRSI
FDELQSHVSDSDRHSGCNSHPHVEGTVWDLIPGVKSSMYPHQREGFEFIWNHIAGGIYLD
KLKKPSSVGGNGCIISHAPGTGKTRLTIVFLQTYMELFPDCRPLLIAPRSMLLTWEEEFK
KWKLDIPFHNLNNWELSGKENQTAVNYVMQAQGSKSVNIESRRMLKLYSWKKKRSILGIS
YRLFEQLSGAQKTGSVDEMGKILLEFPGLVVFDEGHTPRNDQSHMWKALSEIKTKRRILL
SGTPFQNNFQELFNTICLVRPTFAASIESTKFSRDLPRNRGRKSNGEKWKWTSLASSSGK
VVDDKEKHATEVKAQIAPFVHVYKGSVLQDSLPGLRNSVVVLHPTQLQERFHKRIQVVKE
LFRYENLEALISFHPSLLLKEDAFSADQGRLQELKLNPDAGVKAKFVMELIRLSDALKEK
VLVFSQYIDPLNLTRDLLKSQLQWTEGEEVLYMDGKSDMKQRQSSMKVFNDPSSKAKVLL
ASTKACSEGISLVGASRVVLLDVTWNPSVERQAISRAYRLGQKKVVFVYHLLMDRTNEEH
KYSRQVDKSRLSELVFSESDKKKVLEKEIGATVSEDKILQEMAQHGKLKHLFKSIALLHE
DIYFEQLGLSTFG
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggactataacgcgcctgtagcaaagaggacacggctaagtgaagagaaatactggagg
gagttgtgggagaaaaaggctgggaaacgaaaactccgtgatgggtctgataagaaaggg
aaatcacgtaaggggtccgaggcatgggattgtgtctctgtggatgactctgaggagaat
gaggaagccactgtgagtccatccacgggaggcaaggacaagaaaaagggtgggaaaaga
aaatctgctgaggggtctaagaaacagaggtctggttgtgatgattctgatgagtgtgaa
gatcccagtgttgaaatcatcagcgaaagttcatttggaaagcaagacaatgattctttg
ggttttgatagtgttgagagtgcaggatcaaatggaaagaagtctaactctgttgctgtg
gacatggagaatttttttccagttgaagtggaggatagtgatgatgaggtggtgtatttg
ggtgaagggaaagtaggaggttttggttgtttgagttcagagaggagtgatgcctgtgag
gatgctgcttctgatggcaccactgaggatgctgcttctgatggctcagataaatcttgg
aagagtagttctagtgaggattctatttctcatgcctcaggtgaatcagatgatgaggct
tttgaaccagaaaactcagaaagttctgtattttctgagtcgtcgaattcatgcggtgaa
gaggggcatgatgatgaaagagaggttaccaagagaagtgggaaaccaggaaaggggaaa
agtgttgaggagaagaaggggcaggacattgatgctagtgagattgcaaaaggaagtggg
aaagcagaaaaggggaaaagtgttgagattggtgtgaggagaaagagaagggttggattg
gatatgtcagttgatgcagatgatgacattgatagcaacaaagatgatcctattcattct
gctcaagagtttaatagtgtggcaaaacgaactcgttcacgagttagtccaagaagtgaa
aagaagagaatagaatctggaactgtaaatgataatgaggattcttcttctgggtatgat
aatgacaatgaggatgtggatgacgccaattgcagtggtccgagaactaggtgccacgaa
aagaaaacagggtctgatgatgatagaagaaattatgaaagtgacaagacctatggtggt
agtccagaaactgagcgcagtaaatggaacgatgcccagagagtgtgcaagaagaataga
agggatatcgggaatcttactaacagaaggtccatgtgggcaaagaaggattgcaatgtt
ttaaagattcttgtagattccatttatgagaagggagaagggacactgaaagggtcagtt
tcctttggagatgaaggccataaagatgaaagaaatcaaccagaatctgagatgacaact
cttccacttaagttcagttttggggagcagtcaactgtaccaaagaagtcagagtgtgat
ccagaagaaaaagaactatgggacgaccttgaatttgctctcagagcttctgagattgat
tcctctgattctaatgtggttgaaagtcaagattcactccctattgctgatgaagttgaa
acagtagctagcctctgtaggcgaggggttcatcagcttatacttgatgaagagattgga
ctcagatgcaagttttgctcttatttggatcaggagatcaagtatattttaccagacttc
attgactgcccttatggaagatttggcacaagaggctctgaaacagacaaccggtctatc
tttgatgagcttcaatctcatgtttctgattctgatcgccattctggctgtaattctcat
cctcatgttgaaggcacagtgtgggacttaattcctggtgttaaaagtagtatgtatccc
catcagcgtgaaggatttgagtttatctggaaccatatagcgggtggtatttatctggac
aagttgaaaaagccaagtagtgttggtgggaatggatgcatcatatcacatgcgcctgga
acaggaaaaactcgcctgaccattgtctttctccagacatacatggagttattcccagat
tgcaggccacttctgattgctcctcgtagcatgctccttacgtgggaagaggagttcaaa
aaatggaagcttgacattccgtttcacaatcttaacaactgggagttatctggcaaagaa
aatcaaacagctgtaaattatgtgatgcaagctcaaggcagtaaaagtgtcaacatagaa
agcagacgaatgctgaagttgtattcctggaaaaagaagagaagcatcctggggattagt
tacaggctgtttgagcagctttctggagcacagaaaactggctcagttgatgaaatgggg
aaaatccttctcgagtttcctggtcttgtagtgtttgatgaaggacacactcctcggaat
gatcaaagtcatatgtggaaggctttgtcagaaatcaaaacaaaaaggcgcattcttctc
tctggaactccgtttcagaataattttcaggagctcttcaatacaatctgcctcgtgagg
ccaacttttgcagcctcgattgagtctactaaattcagtagagatcttcccagaaaccga
ggccggaaaagcaatggagagaaatggaaatggacttctctggccagcagtagtggaaaa
gttgtcgatgacaaagaaaaacatgctacagaggtcaaagctcagattgcgccatttgtc
cacgtctataaaggttctgtgctgcaagatagtcttcccgggttaaggaactcagttgtt
gttttacacccaacccagctacaggagaggtttcataagagaattcaagtggtgaaggaa
ctgtttcgatatgaaaacctagaggctttaatatcttttcatccttccctcttgcttaag
gaagatgcattttctgctgaccagggtaggttacaagagcttaaattaaatcctgatgct
ggagtgaaggcaaaatttgtgatggaactcatccggctcagtgatgctttgaaagaaaaa
gttcttgttttcagtcagtacattgatcccttaaaccttacaagggatcttctgaaatct
caacttcagtggactgaaggggaagaggtgctgtatatggatggaaaaagtgatatgaag
cagcgtcaatcctcaatgaaggttttcaatgatccatctagcaaagccaaggtattatta
gcttcaactaaagcatgttctgaaggcataagccttgttggagcttccagggttgtattg
ctggatgtcacatggaatccatctgtggagaggcaagcaatatcccgtgcctacaggctg
ggacagaagaaggttgtgtttgtctaccatctcctcatggaccgaactaatgaagagcat
aaatacagtcgccaagttgacaagagtcgtttgtctgagttggtgttttctgagtcagac
aagaagaaggttcttgagaaggaaatcggagccacagtttctgaggataaaatcttgcaa
gagatggcccagcacgggaaactgaagcacctatttaaaagcatagctttactgcatgaa
gacatatactttgagcagctaggcctgtcaacttttggttaa
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integrated database retrieval system
