KEGG   Prunus avium (sweet cherry): 110756294
Entry
110756294         CDS       T05161                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110756294
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110756294
   03036 Chromosome and associated proteins [BR:pavi03036]
    110756294
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110756294
Chromosome and associated proteins [BR:pavi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110756294
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR5 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_Aladin ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_EIPR1 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_ACSF4 Beta-prop_WDR75_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_Nup120_160 Polyoma_coat
Other DBs
NCBI-GeneID: 110756294
NCBI-ProteinID: XP_021813395
UniProt: A0A6P5S8Q9
LinkDB
Position
Unknown
AA seq 290 aa
MSKFMAAPNANLNSNSNPNPNPNPNNSFEVAQPPNDSISSLSFSPKSNILVATSWDNQVR
CWEIHQSGTNLVSQPKAAISHDHPVLCSTWKEDGTTVFSGGCDKQVKMWALGGQPVTVAM
HDAPIKEIAWIPEMSLLVTGSLDKTMKYWDVRQPNPVHTQQLPERCYALSVRYPLMVVGT
ADRNLIVFNLQNPQTEFKRILSSLKYQTRCVAAFPDQQGFLVGSIEGRVGVQHLDEKQND
KNFTFKCHREGTRIYSVNSLNFHPVHHTFTTAGSDGSFTFWDKDSKQRLK
NT seq 870 nt   +upstreamnt  +downstreamnt
atgtcgaagttcatggctgctccaaatgcaaatttaaattcgaattcaaatccaaatcca
aatccaaatccaaacaactcctttgaggtcgctcaacctccaaacgactccatatcaagc
ctaagtttcagtcccaagagcaacattctggtcgccacctcctgggacaaccaggtgcga
tgctgggagatacaccagagcggaacaaatcttgtcagtcagcccaaggcagcgatatcc
catgaccatccggttttgtgctcaacttggaaagaggatggaacaactgtgttctctgga
ggttgcgacaagcaagtgaagatgtgggctttgggtggccaaccagtaacggttgccatg
catgatgcacccattaaagagattgcttggatccctgagatgagcctcttagtcacagga
agcttggacaagactatgaagtattgggatgtgaggcagccaaatccagtgcatacacaa
caactacctgagcgctgttatgctctatcagtgagataccctctaatggttgttggcact
gcagacagaaatctgattgtttttaacttgcagaacccacagactgaattcaagagaatt
ctttcgtccctaaagtatcaaacaaggtgtgttgctgcatttcctgatcagcaaggattc
ttggttggctctattgaagggagggttggtgtacaacatctggatgaaaaacaaaatgat
aaaaactttacctttaagtgccatagagagggcaccaggatatactcagtcaactctctg
aacttccatccagtgcatcacacatttactactgctggttctgatggttctttcactttt
tgggataaggatagcaaacagagactaaag

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