Prunus avium (sweet cherry): 110756314
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Entry
110756314 CDS
T05161
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03020
RNA polymerase
pavi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110756314
09124 Replication and repair
03420 Nucleotide excision repair
110756314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110756314
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110756314
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110756314
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110756314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
DUF5446
Motif
Other DBs
NCBI-GeneID:
110756314
NCBI-ProteinID:
XP_021813419
UniProt:
A0A6P5SC08
LinkDB
All DBs
Position
Unknown
AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDENVLFAG
YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSCFEAEVAKHSVEY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccccagatcgatacgaaagatttgttgtccctgaaggcaccaaaaaggtgtca
tatgagagggacacaaagatcataaacgcagcatccttcacaattgagagagaggaccac
accattggaaacatcctccgcatgcagttgcacagggatgagaatgttctatttgccggt
tacaagcttcctcacccccttcagtacaagattattgtcaggattcacaccaccagccag
tcttcaccaatgcaggcatataaccaggctattaatgatcttgacaaggaacttgatcat
ttaaagagttgttttgaggctgaggtggcaaagcattcagtggagtactaa
DBGET
integrated database retrieval system
