Prunus avium (sweet cherry): 110756373
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Entry
110756373 CDS
T05161
Name
(RefSeq) polygalacturonase At1g48100
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Module
pavi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110756373
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110756373
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
110756373
NCBI-ProteinID:
XP_021813520
UniProt:
A0A6P5S970
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MMITFKLRSLTFFIFIAFSIWCSSLLEPCNARKGGKQYWRQNKGALRKEQKGYGGNHHRH
PAGPRVSTTPLRGDNYITPEETAAKLQKNSGGNSNVFNVLDYGAKGDGKADDTKAFEAAW
AAACKVQASTINVPSGSVFLVKPISFSGPNCEANIVFQLDGKIIAPTSSVDWGSGLLQWL
EFTKLKGISIKGKGVIDGQGSVWWSDSPTYNIPADQTYSSSQDTVIESDSGKMPSTKPTA
LRFYGSDGVSVTGITLQNSPQAHLKFDACTNVQVSDISISSPGDSPNTDGIHLQNSQDVV
IFGTSIACGDDCISIQTGCSNIYVHNVNCGPGHGVSIGGLGKDNTRACVSNVTVRDVKMH
NTLTGVRIKTWQGGSGSVQNIMFSNIQVSEVATPIMIDQFYCDKSKCQNETSAVAVSGVN
YVNIQGTYTTKPVHFACSDSVPCTGVSLDTIQLKSVDEGKQLYDPFCWEAYGELKTSTVP
EIDCLKKGKPYSSSTGAQSGSSDSC
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcacatttaaactaagaagcctcacattctttattttcattgccttttctatt
tggtgttcaagcttgttagaaccttgtaatgctagaaaaggaggcaagcagtactggagg
cagaacaagggtgcattgaggaaggaacaaaagggttatggcggcaatcaccaccgccac
ccggcaggtcctagggtgtctacgacaccgttgaggggagacaattacatcacaccagag
gaaactgcagcaaaactgcaaaaaaacagcggtgggaattccaacgtctttaatgtgttg
gactatggtgctaaaggcgatggaaaagcagatgataccaaggcttttgaagcagcgtgg
gcagcagcttgcaaagtgcaggcatcaactataaatgttccttccgggtccgtgttcctc
gtcaaaccaatctctttttctggccctaattgtgaagcaaatattgtatttcagttagat
ggcaagatcatagctccaacaagctcagtagattggggttcaggtcttctacaatggctc
gaattcacgaagctaaaagggatttcaatcaaaggcaaaggagtaattgatgggcaaggt
tcagtttggtggagtgactcacccacatacaatattcctgcagatcaaacatatagcagt
tcacaggacacggtcatagaaagtgacagtggaaaaatgccaagcaccaagccaaccgct
cttaggttctatggaagtgacggcgtgagtgtcactggtataacacttcaaaacagccct
caggcccacctcaagttcgacgcctgcacgaatgttcaggtttctgatataagtatttcc
tcccctggtgacagtcccaacacagatggaatccacctccaaaactctcaggatgttgtc
atttttggcaccagtattgcttgtggggatgactgtatatccatacaaactggatgctca
aacatatacgtacacaacgtgaattgtggacccggacatggagtcagcatcggagggcta
gggaaggataacactagagcttgtgtatcgaacgtcacagtccgagatgttaaaatgcac
aatacactcactggagtcagaataaagacctggcagggaggatcagggtcagtccaaaac
ataatgttttcaaacattcaagtatcagaagttgcaaccccaatcatgattgaccaattc
tactgtgacaagagcaaatgccaaaatgagacatcagccgtggcagtttcgggtgtaaac
tatgtaaacatacaaggaacgtatacgacgaaacctgtgcattttgcatgcagtgacagc
gtaccgtgtaccggtgtttctctagacaccatacagctgaaatcagttgatgaaggcaag
caattgtatgaccctttctgttgggaggcgtacggagagctcaaaacaagcacagtccct
gaaattgactgcttgaagaaggggaagccatattcaagcagcacaggagctcagtctgga
agtagtgattcttgctaa
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