Prunus avium (sweet cherry): 110756385
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Entry
110756385 CDS
T05161
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110756385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110756385
Spliceosome [BR:
pavi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110756385
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
110756385
NCBI-ProteinID:
XP_021813503
UniProt:
A0A6P5SIX7
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNEADAIVEDDADAENMEEDVDGDLADLETLNYDDLDSVSKLQK
TQRYTDIMQKVEEALVKGSDMSSHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRPKFPELESLVHHPIDYARVVKKIGNEMDVTLVDLEGLLPSAIIMVVSVTASTTSGKP
LLEEVLTKTNEACDRALALDSAKKKVLDFVESRMGFIAPNLSAIVGSAVAAKLMGTAGGL
TSLAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYVEQTEIFQTTPPSLRMRACRLLAAK
STLAARVDSTRGDPSGNTGRAFREEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSMGQSKLAA
KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGGGTQSTYFSETGTFS
KIKRI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgctgattcatttcttgcagaccttgatgaactatctgacaatgaagct
gatgctattgttgaagatgatgctgatgctgaaaacatggaagaagatgttgatggggac
ttggcagacttggaaacgcttaattacgatgatctggatagtgtttcaaaattacagaaa
acacaaagatatactgatataatgcagaaagtggaagaggcactggtgaagggttctgat
atgtcaagtcatggaatagttttagaagatgatccagaataccagctgattgtggactgt
aatgctttgtcagttgacattgagaatgaaattgtaatcatccacaattttattcgtgat
aagtatcgcccaaaatttccagagcttgaatcacttgtgcatcatccaattgattatgcc
cgagttgttaagaaaattgggaatgaaatggatgtaacccttgttgatctggaggggctt
ttaccttccgcaattattatggttgtgtcagttacagcatcaactacaagtggcaaaccg
cttctggaggaagtccttacaaaaacaaatgaggcatgtgatcgagcccttgcgcttgat
tcagcaaagaagaaggttcttgatttcgttgaaagtagaatgggctttattgcaccaaac
ctttctgctatagttgggagtgctgttgcggcgaaacttatggggacagctggcggtctc
acatccttagctaagatgcctgcttgtaatgttcagcttcttggtgctaagagaaaaaac
cttgctgggttttccactgcaacatcacaattccgtgttggttatgttgaacagacagag
atatttcaaactacacccccttctttgaggatgcgtgcctgccggctcttggctgcaaaa
tcaacacttgcagcacgggtggattccacaagaggagatccatctggaaacactggaagg
gcattccgggaggagattcataagaaaattgagaaatggcaggagcctcctcctgcaaaa
caacctaaaccacttccggttcctgattctgaacctaaaaagaagagaggtggtcgccgg
ttaaggaagatgaaggaaagatatgcgataacggacatgaggaagctggcaaataggatg
caattcggtatacctgaagagagttccttaggggatggactgggtgaaggttatggaatg
cttggtcaagctgggagtggcaagctgcgtgtatcaatgggtcagagcaaacttgctgcc
aaagtcgctaagaagttcaaggaaaagaattatggaagcagtggtgctacatctggactt
acttcaagtttagcatttacgcctgtgcaggggattgagctctcgaatccacaggctcat
gcacaccagctcggcggtggaactcaaagcacctacttctctgaaacgggaacattttca
aaaatcaagaggatctga
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