KEGG   Prunus avium (sweet cherry): 110756460
Entry
110756460         CDS       T05161                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    110756460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pavi03400]
    110756460
DNA repair and recombination proteins [BR:pavi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     110756460
SSDB
Motif
Pfam: XPG_N XPG_I UBM XPG_I_2
Other DBs
NCBI-GeneID: 110756460
NCBI-ProteinID: XP_021813624
UniProt: A0A6P5SCL9
LinkDB
Position
Unknown
AA seq 1678 aa
MGVHGLWELLAPVGRRVSVETLAGRRLAIDASIWMVQFMKAMRDEKGEMVRNAHVLGFFR
RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQSKLRKTAEKLLLNHLKAMKLK
VLAEDIKNQRQNQKNDAKGKQSLPDQPGRMGDDNLEKNDMALLSSNQEKLDEMLAASIQA
EEEGGSAKNASKFTAAVPCEEDGEEDDEEMILPEMHGEVDPAVLANLPPSMQLGLLLQSN
KQDNDAKGKKIMSDQTEMVGINLENCEAVSRSCNQEKLDEMIAASIAAEEDAGATNNAST
STASIIVEEDVDEDDDDDEEMILPEMHGKVDPAVLAALPPSMQLDLLVQIRERLMAENRQ
KYQKVKKDPGKFSELQIQSYLKTVAFRREIDQVQKAAAGRGVSGVHSSRIASEAHREFIF
SSSFTGDKQVLASARADKNGDKQQAPKEHPSNSRNSVPSTNNVTGATPDESTSVFDDNIE
TYLDERGHLRVSRVRAMGIRMTRDLQRNLDLMKEIEQEKTNTNKIINTRNVLDERDIDIS
KSSCSNRTVIETSCGDNGDSIDTGVLRSHPGQKKVLESLVGDNSLNDRNNQFTLKLETPI
EISIEDGGESKSFDGDDDLFASLVAGNPVTTNANDVLRKPSSGSDSDCDWEEGTVAVKSK
EPRVEGNMSDDSEVEWEEGVCGITENTSSFPFECGKTVSKGYFEEEANFQEAIRRSLEDI
GDEKCAYASSAEEKLQCFGGEAHKGAEFIDRETKIVEAVLVGKIGKRQNESSCDIVDGVK
KMKGVTYLDSPPAQTMQNVSERENFCGGMECAESVTPSGTKEVHMITEQVLGTFNEDDSL
STLPNTLEKHKAHSFDALSCDATDWVDDQKNEIEAEPSCHIVEMANPAALTGSLTENLTN
DCDVDKTWVKEKSHDNFFQESDHSWDKSSLNSDANAHVEATEANLEEEMLILGQECMNLG
DEQRRLERNVESVSSEMFTECQELLQMFGIPYIIAPMEAEAQCAYMELANLVDGVVTDDS
DVFLFGARSVYKNIFDDRKYVETYFMKDIEKELGLSREKLIRMALLLGSDYTEGVSGIGI
VNAIEVVNAFPEEYGLHKFRDWIESPDPTILGKFDGETGSSAKKRGSKFGDKDIDSQSKK
EEVTAFDQNNCHGQEHKQSADLIEEIKQTFMDKHRKVSKNWHIPPSFPSEAVSVAYTCPQ
VDKSTEPFTWGKPDHFVLRKLCWEKFGWGTQKADELLIPVLKEYDKRETQLRLEAFYTFN
ERFARIRSKRIKKAVKGIAGNQSSELIDDAAQEVSRSRKKRSINTDEAGDEKSEKLSEGT
EKGVFRDQRNSKGKSTIKQSRKRRTTEVPVPSERPKPAEVARTTNRRLHANGKGRGRGRK
VLGRGKGKENPSAEASETSSSKGDDDDDGMDLHMETVEGSGEVRRSGRLRKPVNYSVNDL
ENDDVDDPLDHCDTKCSNEESGEQLLSWDEEDKSEEGPSRFSEKKQQNAGNLSPNAGLCN
DYLETGGGFCLVEDETGELAGGGFCPVEDETGELGLSQHHDPSFEAEVSEDYLKMGGRLC
RDGENDRDEIGVQTTAAASEDSDLLNFSGFVNKVDFGNASVQSSVGTKRPLQGFEGCERT
DAYDTEQSINDEIASNNDDHSKLGVSLQENTVDNSGQPSVGVGALSAMPFLRKKRRKT
NT seq 5037 nt   +upstreamnt  +downstreamnt
atgggagtccacggtctatgggaactactggcccccgtcggccgccgcgtgtccgtcgaa
accctagccggaagaagactcgccatcgatgcgagcatatggatggtgcagtttatgaag
gcaatgcgggacgagaagggagagatggttcgcaacgcgcatgtactcggcttctttcgt
cgaatttgcaagctactgtacctgcggaccaagcccgtctttgtattcgatggcggaacc
ccagccctcaagcgccgcactgtgatcgctcgaagaagacagcgggagaatgcccagtcc
aagcttcgcaagactgccgagaaattgcttctcaatcatcttaaggccatgaagctgaaa
gtcttggctgaggatattaagaaccagaggcagaatcaaaagaatgatgccaagggtaag
caaagtctaccagatcaacctggtaggatgggagatgataatttagaaaaaaatgatatg
gccttgctgagtagcaaccaggaaaagctggatgaaatgttggcagcatctattcaggcc
gaggaagaagggggttcagcaaagaatgcatcaaaatttactgccgctgttccttgtgag
gaggatggcgaagaagatgatgaagagatgatactaccagagatgcacggtgaagttgat
ccagctgttttagctaatttgcctccatccatgcaacttggacttcttttgcagtcaaat
aagcaggataatgatgctaagggtaagaagattatgtcagatcaaactgagatggtggga
atcaatttagaaaactgcgaagcggtctcaaggagttgcaatcaagaaaagctagatgaa
atgattgcagcatctattgcggcagaggaggatgctggtgcaactaataacgcgtcaaca
tcaactgcttctattattgttgaggaggatgttgatgaagatgacgatgatgatgaagag
atgatactgccagaaatgcatggtaaagttgatccagctgtattagctgcattgccccca
tcaatgcaactcgatcttcttgttcaaattagagagaggttgatggcagaaaaccgacaa
aagtatcaaaaagtcaaaaaggatcctggaaagttctctgagctacaaatacaatcttat
cttaaaactgttgctttccgtcgcgagatagatcaagtacagaaagctgctgctgggagg
ggggttagtggtgtccatagctcacggatagcctctgaggctcacagagagtttatcttt
tcttcatcatttactggtgataaacaagtacttgcatctgcaagagctgataaaaatgga
gataagcaacaagcaccaaaagagcatccttcaaattccaggaacagtgttccatctacc
aataatgtgactggagcaaccccagatgaatccacaagtgtttttgatgacaacattgag
acatatttggatgagaggggccatcttcgagtcagtagagtgagagctatggggatccgt
atgacccgtgatttacaaaggaacttggatttgatgaaggagattgaacaggagaaaaca
aatacaaacaagataatcaacactaggaatgtgctcgatgaaagagacattgacatttca
aaaagttcatgtagtaatagaacagtcatagaaacatcatgcggtgataatggtgattcc
attgacactggtgtgttgagaagtcatcctggtcaaaagaaggttttggaatccttagtt
ggtgataatagcttgaatgacagaaataatcagtttacgttaaaacttgaaactcctata
gaaatatctattgaagacggtggtgagagcaagtcttttgatggtgatgatgatcttttt
gcttctttagtggcaggaaatcctgtaactactaatgctaatgatgtattaagaaaacca
tcttctggttctgattcagactgtgactgggaggaaggaactgttgcagtgaaaagtaag
gagcctcgtgtggaaggcaacatgagcgatgacagtgaagtggaatgggaggaaggagtt
tgtggtattacagaaaatacctcatcttttccttttgagtgtgggaaaacagtttctaaa
ggttattttgaagaagaggctaattttcaggaggcaataaggagaagtcttgaggatatt
ggggatgagaagtgtgcttatgcatcatctgcagaggaaaagttgcaatgttttggagga
gaggctcataaaggtgctgaatttattgatagagaaactaagatagttgaggcagttttg
gtcgggaaaattggtaagcgacaaaatgaatcatcttgcgatattgttgatggagtcaaa
aagatgaaaggcgttacatacttggattctcctccagcacaaacaatgcagaatgtaagc
gaaagggaaaatttctgtggaggaatggaatgcgctgaatctgttactccgtcaggaaca
aaggaggtccatatgattactgagcaagtcttgggtactttcaatgaggatgacagttta
tctaccttgcccaataccttagaaaaacataaagctcattcttttgatgccttgtcttgt
gatgctaccgattgggttgatgatcagaagaatgaaattgaagctgagccatcatgtcat
atagttgagatggctaacccagctgccttaacggggtcattgacagaaaatctaacaaat
gattgtgatgttgataaaacatgggttaaggaaaagagtcatgacaatttttttcaggaa
agtgaccacagctgggacaaatcttcactcaacagtgatgcgaatgcacatgttgaagcc
acagaggctaatttggaggaggaaatgctaattctcggccaagaatgtatgaatctggga
gatgagcagagaaggcttgaacgtaatgtagaatcagtcagcagtgagatgttcactgaa
tgtcaggagctactgcaaatgttcggtataccgtacattattgcgccgatggaagcagaa
gcccaatgtgcatatatggaacttgcaaaccttgttgatggtgttgtgactgatgactcc
gatgtgttcttgtttggggcgcgaagtgtgtacaaaaatatattcgacgatcgtaaatat
gttgagacatatttcatgaaggacattgagaaggagcttggcctaagcagagagaagtta
attcgtatggcacttcttcttggaagtgattatactgaaggagttagtgggatcggcatt
gtcaatgctattgaagttgtgaatgcatttcctgaggagtatggcctccataaattccgg
gattggattgaatcaccagatcctaccattctagggaagtttgatggtgaaacgggatca
agtgcaaagaaaagggggtctaagtttggggataaggatatcgattcacagagcaagaag
gaagaagtcactgcatttgaccaaaataattgtcacggtcaagagcacaagcagtcagct
gatcttattgaagaaataaagcaaactttcatggataagcataggaaagtgagcaaaaat
tggcatattcccccctcttttccaagtgaagcagttagtgttgcttatacttgtccacag
gtggacaaatcaactgagcccttcacatggggaaagccagatcattttgttcttcgcaaa
ttatgttgggaaaagtttggttggggtacccagaaggcagatgaattgctaatacccgtt
ctgaaggagtacgacaaacgcgagactcaactgcggctggaagctttttacacgtttaat
gaaagatttgcaagaattcgtagtaagagaatcaagaaagctgttaaaggtatcgctgga
aatcaatcttcagaattgatagatgatgctgctcaagaagtttctagaagtagaaagaag
agaagcataaatactgatgaagctggggatgaaaaatcagagaaactgtcagagggaaca
gagaaaggtgtttttagagatcagagaaattctaaaggaaagtcaaccattaagcagtcg
aggaaaaggaggaccactgaagtgcctgttccatctgagcgaccaaagcctgctgaagtg
gcacgaacaactaatagaagattgcatgcaaatggaaaaggcagaggaagaggtaggaag
gtattgggaagaggaaagggaaaagaaaatcccagtgctgaagcatctgaaaccagctct
agtaagggcgatgatgatgatgatgggatggaccttcatatggagacagtagaagggtca
ggagaagtgcgcaggtcagggcgtttgcggaagcctgtaaattacagtgtcaatgactta
gaaaatgatgatgttgatgatccactagatcactgtgatacaaaatgctccaatgaagag
tcaggggaacaacttctatcctgggacgaggaggataaatccgaggaaggtccttctcgt
ttcagtgagaagaaacagcagaatgcagggaacttgtctcctaatgcgggcctgtgtaat
gattatcttgaaacaggaggtgggttctgccttgttgaagatgaaactggtgaacttgca
ggaggtgggttctgccctgttgaagatgaaactggtgaacttggtctcagccaacaccat
gatccttctttcgaggcagaggtttctgaagactaccttaagatgggagggaggctgtgc
agagatggtgagaatgaccgagatgaaattggtgtacaaactacagctgctgcctctgaa
gattccgaccttctcaatttctccggctttgtcaataaagttgattttggtaatgcttca
gttcaatccagcgttggcactaaaagacctttacaaggatttgaaggttgtgagaggaca
gatgcatatgatactgaacaaagtataaatgatgaaatagcttcaaataatgacgatcat
tcaaagttgggcgtgtcactgcaggaaaatactgtagataattcagggcagccatccgta
ggggtaggagctctaagtgcaatgcctttcctcaggaaaaaaaggcggaagacctga

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