Prunus avium (sweet cherry): 110756541
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Entry
110756541 CDS
T05161
Name
(RefSeq) putative pectate lyase 21 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110756541
Enzymes [BR:
pavi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110756541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110756541
NCBI-ProteinID:
XP_021813669
UniProt:
A0A6P5SJC3
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MASLPYADVDFSLRALSSRAEGFGRFSIGGLHGPLYFVTTLADDGPGSLREGCRKQEPLW
IVFEVSGTIHLSSYLSVSSYKTIDGRGQRVKLTGKGLRLKECEHIIVCNLEFQGGRGHDV
DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITISRCYFAQHDKTMLIGADPSHVG
DRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
GNKKKTFEYYTEKAADREEAKSGFIRSEGDLFLNGAQPCTLTGFSQECMFHPSEFYPHWT
MEAASDSLKTILQILTGWQSIHRPEEQAQAVTV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctaccgtacgccgacgtggatttcagcttgagagcattgtctagtcgggcc
gagggcttcggcaggttttccatcggcggcctccacgggccgctctatttcgtcaccact
ttggcagatgatggtccaggctcacttcgtgaaggatgtcgaaaacaagaaccactgtgg
attgtctttgaggtttctggcaccattcacctttcgtcttacttgagtgtgtcatcttat
aagacaattgatggacgaggccagagagtaaagctcacaggaaagggccttagactgaag
gaatgtgaacacataattgtctgcaacctcgagtttcaaggcggtagaggacatgatgtt
gatggcattcagataaaaccgaattctaggcacatttggatagaccgatgcagccttcgt
gattacgatgatggactcatagatatcaccagacaaagtacagatataactatctctaga
tgttacttcgcacaacatgacaagacgatgcttattggagcagacccctcccacgttggg
gatagatgcattcgggtaacaattcatcattgttttttcgatgggacaaggcaaagacaa
cctcgccttagatttgggaaagttcatctttacaacaattacactcgaaactggggtata
tatgctgtttgcgccagcgtagaatcccagatatactcccaatgcaacatatatgaagca
ggaaataagaaaaagactttcgaatattatacagaaaaggcagcagacagagaagaggca
aaatctggcttcataagatctgagggcgacctattcctgaatggagctcaaccatgcaca
ttaacagggttcagtcaagaatgcatgttccatccaagtgaattttatccacattggact
atggaagcagcatcagattctcttaaaactattctccaaattcttacaggttggcaatcc
attcataggccagaagagcaggcgcaggcggtaactgtatag
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