Prunus avium (sweet cherry): 110756636
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Entry
110756636 CDS
T05161
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110756636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110756636
Spliceosome [BR:
pavi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110756636
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
110756636
NCBI-ProteinID:
XP_021813768
UniProt:
A0A6P5SJ02
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MEKERSSKRHREDRDKEHHKHRSRDADEKRSSKDSDNHRHHHRSDRDSKRERSHEPRDHK
SRRERSREPSDDRDIARDQRERSYEPRGEREGSRERSRHRETKRERSEEREEYRRKRKER
ERSEGRDGDVVDLDDKKRVRVSEEERKDRKRFEEDGKEVNGGQRQSRRFEDRRVKEEEDG
DYVGVVERSNELNVNASEVKKEEVSDDELGNFQGDTTTPNGSGWVGNGAALEPTNASRIV
PETSFAPSHPLPTKVSSIYTTNENKGVSITRSHEVHGKSSTDGASSTAGRSGNLSLDDVE
KIKKALQKQKELTEKLKKIPQLNKGANARKDASQNLGSKELKPPSVTAGILHAPAPSGIR
FDSSKLPIAPAASSTSGMIAEAGLTAVPNLEAVKKAQELAASMGFRQDPQFAPLINLFPG
QVATDVAAPQKPTKAPVLRLDALGREIDELGNLVNATKPNNLSTLKVNINKQKKDAFQIL
KPELDVDPESNPFFDPMMGINKTKILRPKRMNFQFVEEGKWSRDAEHIKLKSKFGEAQAK
EQKAKQAQLAKAKAAPDINPNLIEVSERVITKEKPKEPIPEIEWWDVPLLHSGTYNEVID
GAVVENKLKMEKITIYVEHPQPIEPPTEPAPPPPQPLKLTKKEQKKLRTQKRLAREKDRQ
EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHIDRNIARKLT
PAERREKKERKLFDDPNNVETIVSVYRINELSHPKARFKIDVNARENRLTGSAVISDGMN
VVVVEGGSKSIKRYAKVMLRRINWAEAVKDEEEEDDDVNNDKPANKCVLVWQGSVARPSF
NRFSVHECMTEAAARKIFADAGVAHYWDLAVNFADDE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagagagatcgagcaaacgccaccgcgaagatcgagacaaagaacaccacaag
catcgcagccgtgacgccgatgaaaagcgatcatcaaaggactccgataaccatcgccac
caccatcgatcggaccgcgattccaagcgcgagcgctctcacgagccccgagaccacaaa
tctcgtcgcgaaaggtcacgcgagccgagcgacgaccgcgatatagcacgtgaccagcgg
gagcggtcctacgagccgaggggcgagagagaggggagccgagagaggtccaggcatcgc
gaaacgaagcgcgagaggtcggaagagagagaggaatatagacgtaagaggaaagagagg
gagaggagtgagggtagagatggggatgttgttgatttggacgataagaagagggttagg
gtttcggaggaggagaggaaagataggaagcgatttgaggaagatgggaaggaagtgaat
ggaggtcagagacagagtaggaggtttgaagaccgtcgagtaaaggaagaagaggatggt
gattatgttggagtcgttgaacgcagcaatgaattgaatgtgaatgcaagtgaggttaag
aaagaggaagtgagtgatgacgagcttggtaattttcagggcgacaccaccaccccaaat
gggagtggttgggtgggtaatggtgctgctctggaacctactaacgcatcaaggattgtg
cctgagacctctttcgctcctagtcatccccttcctaccaaggtatcttcgatttatacc
acaaatgaaaataagggagttagtattaccagatctcatgaggttcatggaaaatctagt
acagatggagcatcttcaactgctgggagaagtgggaatctgtctcttgatgatgtagaa
aaaattaagaaagctttacaaaagcagaaggaattgactgagaagctgaagaagattccc
cagttgaacaagggtgccaatgcaagaaaagatgctagccagaacttgggatcgaaggag
ctgaaaccaccatctgtcactgctggaatactgcatgcaccggccccatcagggataaga
tttgattcatcaaaactacccattgcaccagcagcttcatctacaagtggcatgattgca
gaagctggccttacagctgttcccaaccttgaagctgttaaaaaagcacaggagcttgct
gccagtatggggtttcgccaggacccccagtttgctcctcttataaacttgtttccagga
caggtggcaactgatgttgctgcccctcagaagcctactaaggcccctgttcttcgtctt
gatgcccttggaagggaaatagatgaacttggaaatttagtgaatgcgactaaaccaaac
aacctcagcactctaaaggtcaatattaacaaacagaagaaagacgcattccaaattctt
aaacctgaattggatgtggatcctgaatcaaatcccttttttgatccaatgatgggtatt
aataaaaccaagattttgaggccaaagaggatgaatttccagtttgtagaggaaggaaaa
tggtcaagagatgctgagcatataaagttgaagagtaaatttggagaagcacaagccaaa
gagcaaaaggcgaagcaggcacagttggcaaaggcaaaggcggcaccagatattaatcca
aatttgatagaggtgtcagagagagttatcaccaaagaaaaaccaaaggaaccaattcct
gaaattgagtggtgggatgtgcccttattgcactctggtacttataatgaagtcattgat
ggcgcagtagtggaaaataaattaaagatggagaaaatcactatctatgttgaacatcct
caacctatcgagccccctaccgagccagctcctccaccacctcaaccactgaagttgacc
aagaaggagcagaaaaaactccgtacacagaaacgcctggccagagagaaagataggcag
gagatgattagacaaggcctgatcgaacccccgaagccaaaagttaaaatgagtaatttg
atgaaagttcttggctctgaagcaacccaagatccaaccaggcttgaaaaggagattcgg
agtgcagctgcagagcgtgaacaagctcatatagacaggaatattgcacgaaagctcact
cctgccgagcgccgtgagaagaaagaaaggaagctttttgatgacccaaataatgtggag
accatagtctcagtttacaggatcaatgaattgtcacatccaaaggcccgcttcaagatt
gatgttaatgcacgagagaaccggctgactggatcagctgtgatctcagatggtatgaat
gtagtggttgttgaaggtggcagcaaatctattaagaggtatgctaaggttatgcttagg
cgcataaactgggctgaagctgtaaaagatgaagaagaagaagatgacgatgtaaacaat
gataagcctgctaacaagtgtgtgttagtatggcaaggaagtgttgccagaccgagcttc
aatagattttctgttcacgagtgcatgactgaagctgctgcccggaagatttttgctgat
gctggcgttgctcattattgggatcttgcggtcaattttgcggatgatgagtag
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