KEGG   Prunus avium (sweet cherry): 110756636
Entry
110756636         CDS       T05161                                 
Name
(RefSeq) protein RDM16 isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110756636
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pavi03041]
    110756636
Spliceosome [BR:pavi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    110756636
SSDB
Motif
Pfam: PRP3 Prp3_C SabA_adhesion
Other DBs
NCBI-GeneID: 110756636
NCBI-ProteinID: XP_021813768
UniProt: A0A6P5SJ02
LinkDB
Position
Unknown
AA seq 877 aa
MEKERSSKRHREDRDKEHHKHRSRDADEKRSSKDSDNHRHHHRSDRDSKRERSHEPRDHK
SRRERSREPSDDRDIARDQRERSYEPRGEREGSRERSRHRETKRERSEEREEYRRKRKER
ERSEGRDGDVVDLDDKKRVRVSEEERKDRKRFEEDGKEVNGGQRQSRRFEDRRVKEEEDG
DYVGVVERSNELNVNASEVKKEEVSDDELGNFQGDTTTPNGSGWVGNGAALEPTNASRIV
PETSFAPSHPLPTKVSSIYTTNENKGVSITRSHEVHGKSSTDGASSTAGRSGNLSLDDVE
KIKKALQKQKELTEKLKKIPQLNKGANARKDASQNLGSKELKPPSVTAGILHAPAPSGIR
FDSSKLPIAPAASSTSGMIAEAGLTAVPNLEAVKKAQELAASMGFRQDPQFAPLINLFPG
QVATDVAAPQKPTKAPVLRLDALGREIDELGNLVNATKPNNLSTLKVNINKQKKDAFQIL
KPELDVDPESNPFFDPMMGINKTKILRPKRMNFQFVEEGKWSRDAEHIKLKSKFGEAQAK
EQKAKQAQLAKAKAAPDINPNLIEVSERVITKEKPKEPIPEIEWWDVPLLHSGTYNEVID
GAVVENKLKMEKITIYVEHPQPIEPPTEPAPPPPQPLKLTKKEQKKLRTQKRLAREKDRQ
EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHIDRNIARKLT
PAERREKKERKLFDDPNNVETIVSVYRINELSHPKARFKIDVNARENRLTGSAVISDGMN
VVVVEGGSKSIKRYAKVMLRRINWAEAVKDEEEEDDDVNNDKPANKCVLVWQGSVARPSF
NRFSVHECMTEAAARKIFADAGVAHYWDLAVNFADDE
NT seq 2634 nt   +upstreamnt  +downstreamnt
atggagaaagagagatcgagcaaacgccaccgcgaagatcgagacaaagaacaccacaag
catcgcagccgtgacgccgatgaaaagcgatcatcaaaggactccgataaccatcgccac
caccatcgatcggaccgcgattccaagcgcgagcgctctcacgagccccgagaccacaaa
tctcgtcgcgaaaggtcacgcgagccgagcgacgaccgcgatatagcacgtgaccagcgg
gagcggtcctacgagccgaggggcgagagagaggggagccgagagaggtccaggcatcgc
gaaacgaagcgcgagaggtcggaagagagagaggaatatagacgtaagaggaaagagagg
gagaggagtgagggtagagatggggatgttgttgatttggacgataagaagagggttagg
gtttcggaggaggagaggaaagataggaagcgatttgaggaagatgggaaggaagtgaat
ggaggtcagagacagagtaggaggtttgaagaccgtcgagtaaaggaagaagaggatggt
gattatgttggagtcgttgaacgcagcaatgaattgaatgtgaatgcaagtgaggttaag
aaagaggaagtgagtgatgacgagcttggtaattttcagggcgacaccaccaccccaaat
gggagtggttgggtgggtaatggtgctgctctggaacctactaacgcatcaaggattgtg
cctgagacctctttcgctcctagtcatccccttcctaccaaggtatcttcgatttatacc
acaaatgaaaataagggagttagtattaccagatctcatgaggttcatggaaaatctagt
acagatggagcatcttcaactgctgggagaagtgggaatctgtctcttgatgatgtagaa
aaaattaagaaagctttacaaaagcagaaggaattgactgagaagctgaagaagattccc
cagttgaacaagggtgccaatgcaagaaaagatgctagccagaacttgggatcgaaggag
ctgaaaccaccatctgtcactgctggaatactgcatgcaccggccccatcagggataaga
tttgattcatcaaaactacccattgcaccagcagcttcatctacaagtggcatgattgca
gaagctggccttacagctgttcccaaccttgaagctgttaaaaaagcacaggagcttgct
gccagtatggggtttcgccaggacccccagtttgctcctcttataaacttgtttccagga
caggtggcaactgatgttgctgcccctcagaagcctactaaggcccctgttcttcgtctt
gatgcccttggaagggaaatagatgaacttggaaatttagtgaatgcgactaaaccaaac
aacctcagcactctaaaggtcaatattaacaaacagaagaaagacgcattccaaattctt
aaacctgaattggatgtggatcctgaatcaaatcccttttttgatccaatgatgggtatt
aataaaaccaagattttgaggccaaagaggatgaatttccagtttgtagaggaaggaaaa
tggtcaagagatgctgagcatataaagttgaagagtaaatttggagaagcacaagccaaa
gagcaaaaggcgaagcaggcacagttggcaaaggcaaaggcggcaccagatattaatcca
aatttgatagaggtgtcagagagagttatcaccaaagaaaaaccaaaggaaccaattcct
gaaattgagtggtgggatgtgcccttattgcactctggtacttataatgaagtcattgat
ggcgcagtagtggaaaataaattaaagatggagaaaatcactatctatgttgaacatcct
caacctatcgagccccctaccgagccagctcctccaccacctcaaccactgaagttgacc
aagaaggagcagaaaaaactccgtacacagaaacgcctggccagagagaaagataggcag
gagatgattagacaaggcctgatcgaacccccgaagccaaaagttaaaatgagtaatttg
atgaaagttcttggctctgaagcaacccaagatccaaccaggcttgaaaaggagattcgg
agtgcagctgcagagcgtgaacaagctcatatagacaggaatattgcacgaaagctcact
cctgccgagcgccgtgagaagaaagaaaggaagctttttgatgacccaaataatgtggag
accatagtctcagtttacaggatcaatgaattgtcacatccaaaggcccgcttcaagatt
gatgttaatgcacgagagaaccggctgactggatcagctgtgatctcagatggtatgaat
gtagtggttgttgaaggtggcagcaaatctattaagaggtatgctaaggttatgcttagg
cgcataaactgggctgaagctgtaaaagatgaagaagaagaagatgacgatgtaaacaat
gataagcctgctaacaagtgtgtgttagtatggcaaggaagtgttgccagaccgagcttc
aatagattttctgttcacgagtgcatgactgaagctgctgcccggaagatttttgctgat
gctggcgttgctcattattgggatcttgcggtcaattttgcggatgatgagtag

DBGET integrated database retrieval system