KEGG   Prunus avium (sweet cherry): 110756711
Entry
110756711         CDS       T05161                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03013  Nucleocytoplasmic transport
pavi03015  mRNA surveillance pathway
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110756711
  09122 Translation
   03013 Nucleocytoplasmic transport
    110756711
   03015 mRNA surveillance pathway
    110756711
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110756711
   03041 Spliceosome [BR:pavi03041]
    110756711
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110756711
    TREX complex
     110756711
Spliceosome [BR:pavi03041]
 Complex C
  Other components
   EJC/TREX
    110756711
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110756711
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 110756711
NCBI-ProteinID: XP_021813861
UniProt: A0A6P5SJZ1
LinkDB
Position
Unknown
AA seq 244 aa
MPRGLDMSLDDLIAKRKKPGGYHGYFRGRGRGYGPGPTRRLMNRNTVRTAPYSAQPIMQV
VRTTVEQEMVVSGGTYTEEGTKLYLSNLDYDVSNSDIELLFSEIGHVKRHTVHYDRSGRS
KGTAEVIFVHHSDALAAIEKYNNVQLDGKPMKIELVGVNPVAPISVPPSTRSIPGKPNFV
FQSGRGRASARGLFHGRGAGGFRLARGGGQVKKPSGKVKKPREKVTAEDLDADLENYRLK
AMQI
NT seq 735 nt   +upstreamnt  +downstreamnt
atgccccggggtctggacatgtcacttgacgacctcattgcgaaaaggaagaaacccgga
gggtatcatggttatttcagaggccgtggccgtggctacggcccgggcccaactcgtcgg
ctcatgaaccgcaacaccgtcagaacggcgccgtactctgctcaaccgattatgcaagtg
gtgagaacaaccgttgagcaagaaatggtagtgagcggaggcacatacacagaggagggc
accaaattatacctatctaacttagactatgatgtttctaacagcgatattgagttgctc
ttctctgagattggtcacgtgaaacgacatacagtccattatgataggagcggaagatca
aagggaacagcggaagtcatctttgtacaccattcagatgctcttgcagcaattgagaaa
tacaacaatgttcagcttgatggaaagccaatgaaaattgagcttgtaggagtgaatcct
gttgctcctatttctgtgcctccaagtacaagaagcattccgggaaaaccaaactttgtc
ttccaaagtggccgaggaagagctagtgccaggggattgtttcatggccgtggtgctggt
gggtttcgacttgcaaggggtggtggacaggtgaagaagcctagtgggaaggtgaagaag
cctcgtgagaaggtaactgcagaagatctggacgctgacttggagaactaccgcctaaaa
gctatgcagatatga

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