Prunus avium (sweet cherry): 110756711
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Entry
110756711 CDS
T05161
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
pavi03015
mRNA surveillance pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110756711
09122 Translation
03013 Nucleocytoplasmic transport
110756711
03015 mRNA surveillance pathway
110756711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110756711
03041 Spliceosome [BR:
pavi03041
]
110756711
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110756711
TREX complex
110756711
Spliceosome [BR:
pavi03041
]
Complex C
Other components
EJC/TREX
110756711
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110756711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
110756711
NCBI-ProteinID:
XP_021813861
UniProt:
A0A6P5SJZ1
LinkDB
All DBs
Position
Unknown
AA seq
244 aa
AA seq
DB search
MPRGLDMSLDDLIAKRKKPGGYHGYFRGRGRGYGPGPTRRLMNRNTVRTAPYSAQPIMQV
VRTTVEQEMVVSGGTYTEEGTKLYLSNLDYDVSNSDIELLFSEIGHVKRHTVHYDRSGRS
KGTAEVIFVHHSDALAAIEKYNNVQLDGKPMKIELVGVNPVAPISVPPSTRSIPGKPNFV
FQSGRGRASARGLFHGRGAGGFRLARGGGQVKKPSGKVKKPREKVTAEDLDADLENYRLK
AMQI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgccccggggtctggacatgtcacttgacgacctcattgcgaaaaggaagaaacccgga
gggtatcatggttatttcagaggccgtggccgtggctacggcccgggcccaactcgtcgg
ctcatgaaccgcaacaccgtcagaacggcgccgtactctgctcaaccgattatgcaagtg
gtgagaacaaccgttgagcaagaaatggtagtgagcggaggcacatacacagaggagggc
accaaattatacctatctaacttagactatgatgtttctaacagcgatattgagttgctc
ttctctgagattggtcacgtgaaacgacatacagtccattatgataggagcggaagatca
aagggaacagcggaagtcatctttgtacaccattcagatgctcttgcagcaattgagaaa
tacaacaatgttcagcttgatggaaagccaatgaaaattgagcttgtaggagtgaatcct
gttgctcctatttctgtgcctccaagtacaagaagcattccgggaaaaccaaactttgtc
ttccaaagtggccgaggaagagctagtgccaggggattgtttcatggccgtggtgctggt
gggtttcgacttgcaaggggtggtggacaggtgaagaagcctagtgggaaggtgaagaag
cctcgtgagaaggtaactgcagaagatctggacgctgacttggagaactaccgcctaaaa
gctatgcagatatga
DBGET
integrated database retrieval system