Prunus avium (sweet cherry): 110756838
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Entry
110756838 CDS
T05161
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Module
pavi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110756838
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110756838
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
110756838
NCBI-ProteinID:
XP_021814001
UniProt:
A0A6P5SKC4
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All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MAYRSICNCNNYCVALVVLFMGVLLSNAAAASNSFNVMKFGAKPDGKTDSTQAFVKTWAS
ACSSASGQPNADAVMYIPKGRFLIKAVVFRGPCKTRRVTVRIDGTLVAPTDYWALGNSGY
WILFIKVTGVTVVGGSLDAKGAAFWACRRSGKTCPVGARSITFNWANNIVISGLTSINSQ
QTHLVINSCNNVVVRNVKLIAPSESPNTDGIHVQSSAGVTITGGILQTGDDCISIGPGTT
NLHISNIKCGPGHGVSIGSLGKELKEDGVQNVTLTNAVFSGSDNGVRIKSWARPSTGFVR
NILFQNIIMRNVENPIIIDQNYCPNNRACPNQSSGVKISQVTYRNIQGTSATAEAVTFDC
SPSHPCTGIRLQNIKLTYMNRDATSSCKNIDGTSSGLLVPQSCL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcttatagaagcatctgcaactgcaacaattattgtgtagcactagttgtgttattt
atgggcgtactattatccaatgcagcagcagctagcaatagttttaatgtgatgaaattt
ggtgcaaaaccagatgggaaaacagactccacccaagcattcgtgaagacatgggcatca
gcatgcagctctgcctctggccaacccaatgctgatgctgtcatgtatatccccaaagga
aggttcttgattaaggctgtggtgtttagaggtccttgcaagactagaagagttacagtt
cggatagatggaaccctcgtggcccccacagactattgggcattgggcaactcaggctac
tggattttattcattaaggtcaccggagttacagtggttggtggttccctcgatgccaaa
ggtgctgcattttgggcttgcaggagatctgggaagacttgccctgttggagctaggtcg
ataacgttcaattgggcaaacaacattgtgatcagtggtttaacatccatcaacagtcag
caaactcaccttgtaatcaacagctgcaacaacgtggttgttcgaaacgtgaagctgatt
gctccgagtgaaagccccaacacagacggcattcatgtgcagagctcagctggtgtaacc
atcaccggcggcatcttgcaaactggagacgattgcatatcaattggtcctggcaccaca
aacctccatatcagtaacatcaagtgcggcccaggccatggtgtaagcattggaagtcta
ggcaaggagctgaaggaagatggcgtacaaaatgtgacgcttacaaacgcagttttcagt
ggatcagacaatggagtacgaataaagtcatgggctaggcccagcactggcttcgtaagg
aacattctcttccaaaacatcatcatgaggaacgttgaaaaccccatcatcattgatcag
aactattgcccaaataaccgagcctgtcctaatcagagttcgggtgtgaagattagtcaa
gtgacgtacagaaatatacaggggacgtcggcaacagcagaggcagtaacatttgactgc
agccctagtcatccatgtacagggattagattgcaaaacattaagcttacatatatgaac
agggatgccacatcttcatgtaagaacattgacggaaccagcagtggactactggtgcct
cagagttgtctataa
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