KEGG   Prunus avium (sweet cherry): 110756855
Entry
110756855         CDS       T05161                                 
Name
(RefSeq) sm-like protein LSM36B
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03018  RNA degradation
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110756855
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110756855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110756855
   03041 Spliceosome [BR:pavi03041]
    110756855
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110756855
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110756855
Spliceosome [BR:pavi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110756855
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 110756855
NCBI-ProteinID: XP_021814021
UniProt: A0A6P5SKE4
LinkDB
Position
Unknown
AA seq 91 aa
MSGGGEKGTGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTTRRNLADGA
NT seq 276 nt   +upstreamnt  +downstreamnt
atgagtggagggggagagaaagggacaggaaccacaaaaactcctgcagatttccttaaa
tcaattcgtgggcgaccagttgttgttaaactgaattctggtgttgactatcgaggtatt
cttgcttgtcttgatggttatatgaatatagcgatggaacaaacagaagaatatgtcaac
ggacagttgaaaaataagtatggtgatgcttttattcgtggaaataatgttctgtacatt
agtacgacgaggaggaatttagcagatggtgcatag

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