Prunus avium (sweet cherry): 110757098
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Entry
110757098 CDS
T05161
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pavi03036
]
110757098
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Meiosis-specific proteins
Others
110757098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_29
nSTAND_NTPase5
AAA_23
Motif
Other DBs
NCBI-GeneID:
110757098
NCBI-ProteinID:
XP_021814329
UniProt:
A0A6P5SEI1
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MEDDAGERSSFVIGLIENRAKEVGVAAFDLRLASLHLSQYIETSSSYQNTKTLLQFYDPM
VIIVSPNKLAPDGLVGVSELADRFYATVKKVVMARGCFDDTKGAVVIKNLAAKEPSALGL
DTSYKQYYLCLAAAAATIKWIEAEKGVIITNHSLLVTFNGSFAHMNIDATSVQNLEIIEP
LHSTLWGTSNKKRSLLNMLKTTKTVGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
LFFGLAQVLSKFPKESDRVLCHFCFKPRKITNKVMGVDYARKSQVLVSSIILLKTALDAL
PLLSKVLKDAKCFLLANVYKSVCENEKYAAIRRRIGEVIDEDVLHARVPFVARTQQCFAV
KAGIDGLLDIARRSFCDTSEAIHNLANKYREDFKLPNLKLPFNNRKGFYFSIPHKDIQGK
LPSQFIQVLKHGNNLHCSTLELASLNVRNKSAAAECYIRTEVCLEELVDAIREDVSALTL
LAEVLCLLDMIVNSFAHAISTKPVDRYTRPEFTDNGPMAIDAGRHPILETIHNDFVPNSI
FLSEASNMVLIIGPNMSGKSTYLQQVCLIVILAQIGCYVPARFSTLRVVDRIFTRMGTVD
NLESNSSTFMTEMKETAFIMQNVSQRSLIVMDELGRATSSSDGFAIAWSCCEHLLSLKAY
TIFATHMENLSELVTVYPNVKILHFDVDIKNNRLDFKFQLKDGARHVPHYGLLLAEVAGL
PSSVIETARNITSRITEKEVKRMEVNCLQYQPIQMAYHVAQRLICLKYSSQDEDSIREAL
HNLKDSYIHGRL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgcaggagagagatcgagcttcgttatcggcctcatcgagaacagagct
aaggaggtgggagttgcagcctttgatttaaggttggcttctctccatctttctcaatat
attgaaactagcagctcatatcagaatacaaaaactttgctgcaattctatgatcctatg
gtgataattgtttcaccgaacaagctggcacctgatggtttggttggagtttcagaattg
gctgacagattttatgctacagtcaagaaggttgtaatggcccgtggttgcttcgatgac
actaagggtgctgtggtgattaaaaatctagcagcaaaggaaccttctgcactaggattg
gatacttcttacaagcagtattacctctgcttggctgcagcagcagctacaattaagtgg
atagaagcagagaaaggggtcatcattacaaaccactcacttttggtcacttttaatgga
tcatttgcccatatgaatattgacgctactagtgttcaaaatttggaaatcattgagcca
cttcattcgacactttggggaacaagcaacaagaaaagaagtttattgaacatgctcaag
acaacaaaaactgttggagggtctagacttcttcgtgccaatctattgcagcctttaaaa
gatattgaaactataaatgcccgtcttgattgcctggatgagctcatgagcaatgaacag
ctgttctttggacttgctcaggttttgagtaaatttcccaaagagagtgatagggtactt
tgtcacttctgcttcaagccaaggaaaataacaaacaaagtcatgggtgttgattatgct
agaaaaagccaggtcttggtttcaagcattattctcctcaaaactgctctagatgccttg
cctttactctcgaaggttcttaaagatgcaaagtgttttcttcttgcaaatgtttacaag
tctgtatgtgaaaatgagaagtatgctgccattagaaggaggattggagaggtgattgat
gaagatgtgcttcatgcacgggttccttttgtagcccgcacacagcagtgttttgctgtc
aaggctggaattgatggacttttggatattgcacggagatcattttgtgatactagtgaa
gctatacataatctggctaacaagtatcgtgaagatttcaagttgcccaatttgaaactc
ccatttaacaataggaaagggttctactttagcattccacataaggacattcaagggaag
cttcctagtcagttcattcaggtattgaaacatggtaacaatttacactgctcaaccttg
gagcttgcttctctaaacgttagaaataagtctgcagctgcagaatgctacatacggaca
gaagtttgcctggaagaattagtagatgccatacgagaggatgtttctgcactcacactg
cttgcagaggtcttatgccttttggatatgatcgttaattcatttgcacatgccatttcc
acaaagccagttgatcgttacaccagaccagaatttacagataatggccccatggcaatt
gatgctggaagacaccctatcctagagaccatacacaatgacttcgttcccaacagtata
tttttatcagaggcgtcaaacatggtgcttatcataggcccaaacatgagtggaaagagt
acttaccttcaacaagtgtgtcttatagttattcttgctcagatcggttgttatgttcct
gctcgcttctcaactctaagggttgttgatcgtatatttacaaggatgggtacagtagat
aatcttgaatccaactctagtacgttcatgacagaaatgaaagaaacagcttttatcatg
caaaatgtctcccagaggagtctgattgttatggatgaacttgggagggctacatcttct
tctgatggatttgcaattgcttggagctgctgcgaacatttgttatcactgaaagcgtat
actatatttgctactcatatggagaacctatcagaactagtaaccgtctatccaaatgtg
aaaatacttcactttgatgttgacattaaaaataaccgtctagatttcaagtttcaactg
aaggacggagcgagacatgttccgcactatggccttctattagcagaagtagcaggactg
ccaagctcagtaattgaaacagccagaaacatcacatccaggatcacagaaaaggaagtc
aagaggatggaagtaaactgcctccaataccaaccgatccagatggcgtaccatgttgct
cagcggcttatatgtttgaagtactccagccaggatgaggattcaatcagagaagcactg
cataacttgaaagacagctacattcatggaaggctgtag
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