Prunus avium (sweet cherry): 110757170
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Entry
110757170 CDS
T05161
Name
(RefSeq) ubiquitin receptor RAD23c-like
KO
K10839
UV excision repair protein RAD23
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03420
Nucleotide excision repair
pavi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110757170
09124 Replication and repair
03420 Nucleotide excision repair
110757170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pavi03051
]
110757170
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110757170
Proteasome [BR:
pavi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
110757170
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
110757170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
Dsc3_N
TECR_N
UBA_RAD5A
UBA_3
Ubiquitin_4
Crinkler
Motif
Other DBs
NCBI-GeneID:
110757170
NCBI-ProteinID:
XP_021814422
UniProt:
A0A6P5SJK0
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MKIFVKTLKGTHFDVEVKPEDTVADVKKQIETSQGADVYPASQQMLIHQGKVLKDSTTLD
ENKVAENSFVVIMLTKSKSSSGEGSGASTATTTKAPQPSAPSAAPTATLTAPQAPIPTSA
PPASVTTPAPVSSATTEVESDPYGQAASDLVAGTNLEGTIQQILDMGGGTWDRDTVVRAL
RAAFNNPARAIDYLYSGIPEQPEVPPAARIPVSGEVANLPAQRPQSAQPAATPPSGPNAN
PLNLFPQGLPNVGAGGAGAGNLDFLRDSQQFQALRAMVQANPQILQPMLQELGKQNPNLM
RLIQQHQADFLRLINEPVEGGEGNILGDAAVPQSISVTPEEREAIERLEAMGFDRAIVLE
VFFACNKNEELAANYLLDHMHEFEE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttgtcaagactctcaagggcactcacttcgacgtcgaagtgaagcctgag
gacacggttgctgatgtgaagaaacagatagaaactagtcaaggtgcagatgtatatcct
gcttcacaacagatgctcattcatcaaggaaaagtacttaaagatagcacaacattggat
gaaaacaaagttgctgaaaacagctttgttgtgataatgttgacaaagagtaagagctcg
tctggtgaaggttcaggtgcatcaactgctactacaactaaggcaccacagccaagtgca
ccttctgctgctccaactgcgacattaacagcacctcaggctccaataccaacctcagca
ccgcctgcttctgttaccacacctgctcctgtctcttcagctaccacagaggtagaatct
gatccatacggccaagcagcatctgatctggtagcaggaactaacttggagggaacaatt
cagcaaattctggatatgggtggaggtacttgggacagggatactgttgtacgtgctctt
cgtgctgctttcaacaacccagcgagagctattgactatctttattctggtatccctgag
caacctgaagttccacctgcagcccgtattcctgtgagtggggaagttgcaaaccttccg
gcacaacgtccacaatcagcacaaccagcagccactccaccaagcggacctaatgccaat
cctttaaacctttttccacagggccttccgaacgtgggtgctggtggtgctggtgcaggc
aatcttgattttcttcgtgacagccaacagttccaagccttgcgagctatggtgcaggct
aatccacaaatattgcagcctatgcttcaagagttagggaaacaaaatcctaatcttatg
aggctaattcaacagcatcaggctgacttccttcgcctgattaatgaacctgtggaaggt
ggagaagggaacatattgggcgatgcagcggtgccgcagtcaataagtgtcactcctgag
gagcgtgaagctatagaacgtcttgaagcaatgggatttgatcgagcaattgtattggag
gttttctttgcctgcaacaagaacgaagagttggctgccaactacctcttagaccacatg
catgaatttgaggaataa
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integrated database retrieval system
