Prunus avium (sweet cherry): 110757379
Help
Entry
110757379 CDS
T05161
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03082
ATP-dependent chromatin remodeling
pavi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110757379
03083 Polycomb repressive complex
110757379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pavi03036
]
110757379
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110757379
Histone modification proteins
HAT complexes
HATB complex
110757379
HDAC complexes
Sin3A-HDAC complex
110757379
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110757379
PRC2.2
110757379
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110757379
Heterochromatin formation proteins
Other heterochromatin formation proteins
110757379
Chromatin remodeling factors
NuRD complex
110757379
NuRF complex
110757379
NuRF complex (fruit fly)
110757379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
WD_LRWD1
NBCH_WD40
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Phage_CRI
Motif
Other DBs
NCBI-GeneID:
110757379
NCBI-ProteinID:
XP_021814665
UniProt:
A0A6P5SCP0
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRAEVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVNAEVFVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKTLEAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPSVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPEEPA
KP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagacgaggaagaaatgaggggagagattgaggagaggctgataaacgaggag
tacaagatatggaaaaagaacacacctttcttgtacgatctggttataacccatgcccta
gaatggccttcgcttacagtcgagtggcttccggaccgagaagagcctccagggaaggac
tattcggtgcagaagatgattttggggacgcacacctccgagaatgagcctaattacctt
atgctcgctcaggtacagctgccattagaggacgcagagaacgatgctcgccattatgat
gatgatcgagctgaggttggcggttttggttgcgccaatggcaaggtgcaaataatccag
caaataaatcatgatggagaggttaatcgggctcgttatatgcctcagaatccatttatt
attgccacaaagaccgtcaatgctgaagtttttgtgttcgattatagcaaacacccatct
aagcctcctttagatggtgcatgcagtcctgacttgaggctgaggggccacagcactgaa
ggatatggtttatcatggagtaagttcaagcagggtcatttactcagtggttctgatgat
gctcagatatgcctttgggatattaacgcgactcccaagaacaaaaccctcgaggctatg
caaatatttaaggttcatgaaggtgtggtagaagacgtagcatggcatttgaggcatgaa
tacttatttggttctgttggtgatgatcaataccttcttatatgggatctccggactcca
tccgttaccaagcctgtccaatctgtagttgctcatcaaagtgaagttaactgtttggct
ttcaatcccttcaatgaatgggttgttgcaactggatccactgacaaaactgttaagctg
tttgatctacgcaaaatcaatactgctctccacacctttgattgccataaggaggaggtt
ttccaagtcggttggaatccaaaaaatgaaactatcttagcttcttgttgtcttggcagg
cgactcatggtgtgggatcttagcagaatcgacgaagagcagacaccagaggatgctgaa
gacggtccaccggagttgctttttattcatgggggtcacaccagtaaaatatctgatttt
tcgtggaacccatgtgaagattgggttgttgctagtgttgctgaagataacatactccaa
atctggcagatggccgagaacatttaccatgacgaagatgatttacctgaagagccggca
aagccttag
DBGET
integrated database retrieval system
