Prunus avium (sweet cherry): 110757424
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Entry
110757424 CDS
T05161
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110757424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110757424
04121 Ubiquitin system [BR:
pavi04121
]
110757424
03036 Chromosome and associated proteins [BR:
pavi03036
]
110757424
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110757424
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110757424
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110757424
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110757424
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110757424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
zf-C3HC4_3
zf-RING_6
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
Prok-RING_4
zf-RING_5
PHD_NSD
PTCB-BRCT
zf-C3HC4_4
zf-RING_10
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
110757424
NCBI-ProteinID:
XP_021814707
UniProt:
A0A6P5SKD8
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MADSKCSDSSTRSMMNPCVLHFQKLGLELKCSLCLSLLHRPTLLPCNHIFCNSCIPNSTH
FGKECPLCKVQVADRDLRPAPFMENIVAIYKSLDASFCANLLQPISSDVRTVSPNISFAG
KMAKEPFDNGQGGNSNSGQSIYSSGANERVWVPCSLNRSVADVVDTNCKVDKCVMPIDGF
NGVGNLNSPPSSQIRAGGLEECMTIERDMNQVAQSLPDSPPSFGDTKCSDNDSSDRHREQ
ISESSLVRKSISEIDDSRTGLKRHDSSATENDGHLRDLKRQKNLNFEPVSTTNSELEHGF
RTSSNTICAFCQSSTISEVTGPMLHYSNEKLVVGDEAAVSNAIPVHRICIDWAPQVYFVG
EAVKKLKAEVARGAKLKCSKCGLKGAALGCFVKSCRRSYHVTCAIGISKCRWDRENFLLL
CPAHCSVKFPSEKPNSENPKIRPLSNSWVASNGAKEWILCPSGLSSEEKLLLIKFAKMNG
GTVSKIWRPDVTHVIAAVDEDGAYVRTLKTCMAILAGRWILKIDWVKACMEAMHHVDEEP
YEVSLDNYGCHDGPKTGRLRALNKDPKLFNGLSFYFAGDFVLDRQEDLEDLIIAAGGTVF
DSTEEALEQSSLGQAASRTLVVYNLDPQEGCKLGEEVSILWQRSNEAQDIAAKIGSQIIG
HTWLLESIARCELQRLVC
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctaagtgtagtgatagttctaccaggtcgatgatgaatccgtgcgttctt
cattttcagaaactgggtctcgagctcaagtgttcgctctgcttgagtttgcttcatcgg
ccaactttgcttccatgcaatcacattttctgcaattcctgcatacccaattcgacgcat
tttggaaaagagtgccctttgtgtaaagttcaagttgcggatcgagatctcaggcctgcg
cctttcatggaaaacatagtagcaatctacaaaagcttggatgcgtctttctgtgccaac
ttgttgcagcccatttcttctgatgttaggactgtttcacctaatatcagttttgctggg
aaaatggctaaagaaccatttgacaatggccaagggggtaattcaaacagtgggcaatcc
atttattcatcaggtgctaatgaacgagtttgggttccatgtagtctgaatcgttctgtt
gcagatgtagttgacacgaattgcaaagtagataagtgtgtcatgccaatagatggattt
aatggagtaggaaatctcaattcgcctccaagctctcaaataagagctgggggacttgaa
gaatgtatgaccatagagagagacatgaatcaggtcgcgcagtcattgccggacagtcct
ccttcatttggtgataccaaatgttcagataatgatagctctgatcgtcaccgtgagcaa
atttcagaaagttctttggtcaggaaatctatcagtgaaattgatgatagtagaacaggt
ctgaaaaggcatgatagttctgcaactgaaaatgatggtcacttgagggacctcaaaaga
caaaagaatctgaactttgagccagtttcaactactaattctgagctggaacatggattc
aggacatcttctaataccatttgtgcattttgccagtcttccacaatctcagaggttaca
gggccaatgctgcattattctaatgagaaattggtagtgggagatgaggcagctgtttca
aatgccatccctgttcacagaatatgcattgattgggcaccacaagtgtattttgttggt
gaagctgttaagaagttgaaagcagaagtggcaaggggtgcaaagcttaaatgcagcaaa
tgtgggctaaagggagcagcattgggatgctttgtgaagtcctgccggagaagctatcat
gttacctgtgcaattggaatttctaaatgtcgttgggacagggaaaactttctgctgctc
tgtccagctcattgttctgttaaatttcccagtgagaagccaaattctgagaatcccaaa
atacgtccgctgtccaacagttgggtagcttcaaatggagcaaaagaatggattttatgc
ccttctggtttgtcttctgaagagaagcttcttttgatcaagtttgccaagatgaatggt
ggaactgtgtccaagatctggagaccagatgttacacatgtaattgcagctgtggatgag
gatggtgcatatgtccggactttaaaaacctgcatggccattttggctggaagatggatt
ctgaaaattgactgggtaaaagcatgcatggaagccatgcatcatgtagatgaagaacct
tatgaagttagtctcgataactatgggtgtcatgatggcccaaaaactggcaggcttcgg
gcattaaacaaggatccaaagctcttcaatggtttgagtttctattttgctggtgatttt
gtactggatagacaggaagatcttgaagatttgatcatagccgcaggaggtactgttttt
gacagcacagaagaagcgctggaacaaagttctcttggacaggcagcttcaaggacgcta
gttgtttacaaccttgacccccaagaaggatgcaagttgggggaagaagtttcaatcctt
tggcaaaggtcaaatgaagcccaggatatagccgcaaaaattggatcccaaatcattggc
cacacctggctcttggaatcaattgctagatgtgagttacagcgtcttgtctgttga
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