Prunus avium (sweet cherry): 110757607
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Entry
110757607 CDS
T05161
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
110757607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110757607
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
110757607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
110757607
NCBI-ProteinID:
XP_021814967
UniProt:
A0A6P5SL88
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MEEEGGGKVRVLIEKATTSTEPEVDPRLLKAIKSVVRRSDSELRLAAHILMDLMKREHSQ
VRYLTLLIIDELFMRSKLFRTLVVESLDQLLTLSVGFRHNSPLPGPTNVATALRSKAIEF
LEKWNASFGIHYRQIRLGFDYLKNTLKYQFPNLQANAARLQQERREREKKSKEILLNKFE
TLKKNFASMKEEIQSTADEIGECLEIVRAKEELLCPLDDEDMEEFHSYEFRQLRLHSLEE
AEKIHENSENKVVFDALRELYKLLVMKHLVAVQEWISVLVRVELTDNRARDSYLKEFIDI
RNHIRSVKKKCEESGCAIPNTTNHEEEDFWEEGKIGSIESKSSSIPNNRTEDSVASTSKE
VLDRVPECHANERDGNKRLSRKDGATNSDPLRSKLLAEAPEVNWGSYLDNWGSKRDVLAN
HRGLELESHWGRVDQDAVIPAEKIAELNLQTTLYKEQQVEIQPCRAPLSKGELCQRRDLR
TCPFHGPIIPRDDEGKPLNQNPSKDEKTPDLGTDIVEQLAKQAVKNVREKDKELARKREI
DKKSLKRAKLAKIREHNEAVLRDAAMASTSRSADIGEDWVATNGENRSSRNKKKALASML
QKKETPKDRLAQRLLNTRASAATVRQLTLGEDANYREAFPNQW
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaggggggagggaaggtgagggttttgatagagaaggcaacgacctcgacc
gaaccagaggtggacccgcgcctcctcaaggccatcaagtcggtggtacgccgctccgat
tcggagctccgactcgccgcccatattctcatggatcttatgaagcgcgagcactctcag
gtccggtacctcacacttcttataatcgatgagctttttatgaggtcaaagctttttaga
acccttgttgtggagagtttggatcagttattgactttgagtgttggatttagacacaat
tcgccactcccaggtccgacaaatgttgcgactgctctgcgttcgaaggcaattgagttt
ttggagaagtggaatgcttcatttgggatacattataggcagattagattaggatttgat
taccttaaaaacacgcttaagtatcaattcccaaatctacaggcaaatgcggctcggctt
cagcaggaaagaagggaaagggagaagaagtcgaaagagatcttattgaacaagtttgag
actttgaaaaagaattttgcatcaatgaaggaagaaatacagtcaacagctgatgagatt
ggggagtgtttagaaattgtacgtgctaaagaggaacttttgtgtcctttagatgatgaa
gatatggaagagtttcattcttatgagttccggcagttgcgcttacattcgttggaagaa
gcagagaaaattcatgagaatagtgaaaacaaagtagtttttgatgcactgagagagctt
tacaagctattggtaatgaagcatttggttgcagtgcaagaatggatctctgttcttgta
agggttgaactgactgataacagggccagagattcttatttgaaggagttcattgatatc
cggaatcatattcgatcagtgaagaagaagtgtgaagaatcgggttgtgctattccaaac
actacaaatcatgaagaagaagatttttgggaggaaggcaagattggatcaattgagagt
aagagttctagtattcccaataacagaactgaagattcagtggcatcaacttccaaggag
gtactagacagagttcctgaatgccatgctaatgagagagatggcaataaaaggctcagt
cgtaaagatggagcaaccaattcagaccctttgaggagtaagcttttggctgaagctcca
gaggtgaattggggctcttatttggacaactggggttcaaagagggatgtattggctaac
catcggggattggagcttgaaagtcattggggcagggtggatcaggacgcagttattcca
gcagaaaagattgcggaattaaatcttcagactactctatacaaagaacagcaggttgaa
attcaaccatgccgagctcctctaagcaaaggagaactttgtcagagaagagatttgaga
acttgcccatttcatggacctattatacccagagatgatgagggaaagccactcaatcag
aacccttcaaaagatgagaaaactcctgatttaggcacagatatagtggagcagttagcg
aaacaagccgtgaagaatgttcgtgaaaaagataaagagttggcaaggaagagagaaata
gataaaaagtcactgaagcgtgcaaagcttgcaaaaatacgagaacacaatgaagcagtt
ttacgtgatgctgcaatggcttcaacttctagatctgcggatattggagaagattgggtg
gcaactaatggtgagaaccgatcatccagaaacaaaaagaaagcccttgcctcaatgctg
cagaagaaagagacaccaaaagacagattagctcagaggcttttaaatactcgtgcaagt
gctgccactgtaagacagcttacattgggtgaggatgcaaattacagagaagccttcccg
aatcagtggtaa
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