Prunus avium (sweet cherry): 110757653
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Entry
110757653 CDS
T05161
Name
(RefSeq) uncharacterized protein LOC110757653 isoform X1
KO
K24155
rabconnectin-3a
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110757653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pavi04131
]
110757653
Membrane trafficking [BR:
pavi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110757653
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
110757653
RAVE complex
110757653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_TEP1_C
EIF3I
Motif
Other DBs
NCBI-GeneID:
110757653
NCBI-ProteinID:
XP_021815031
UniProt:
A0A6P5SN58
LinkDB
All DBs
Position
Unknown
AA seq
2544 aa
AA seq
DB search
MPDVDIPSAVDPTHHLPLQFLPSDPTPPAPIRSDPPGCTLDWLPDFLDLSWVAYGASSLL
VISHFPSPLSDDETVIGPIVRQIFELSGDPSSAVEAVSWSPSTPSIGELAAAAENCVWVF
SHDSARSKGSFCWSQNAVLVQSTKVEAMRWTGSGDGIIAGGIDVVLWKRNGRSWEIAWKF
KADMPQSMVSATWSVEGPFATAAYQTEGLLTNKASKCVLVCQSVGKSGFLKSELHHPHPI
SMIQWRPLTGSLNRDAKHPPRQVLLTCSTDGTARLWCEVDDGRGRKVGKDINDHKTMRCS
FFVAAVIEINQALNGILGTDIYLMWATEIGGVHKNSEGAKQIFFGKGYEQDQPGNCEWLI
GSGPGMLVNFWAIHCLDDVSPIRFPRVSLWKTQKLQGLKGGLSDCKDGIPLNKVVISRNC
LSSPPTLCSFVQLLPCNSLVWSQLYTQTSNNAEDISLNKSGTENILSCSAGGLLNLDGHA
GRILQVAVHPYSCEVELAVSLDSCGLLLFWFFSTISNCILGRPTLIPTWELCGKLVTQGS
CSKYTSLRWAPSIVNEAVVLLMGHAGGVDCFVVKFHHNEEESIECHYLCTIPFTGHGPYE
NGPTSIFSIPLPSTCHKTLKSNKFMLLGVWMNGFQALSWEITLHSFDLSRSYCECKFDAG
SAPECSMWGFETTFANERYCLNIKPCSSKIPDPHAHDDVSSFAVVCPGKLICIEKSLAST
IDRCCPPYILATGCSDGSLKLWRSNMDKPSTPQIPWELVGMLVAHQGPISSICLSDCGRK
IATICKELPSNTVSTLRIWDPVLLADAGTFMLEDTLSFGQDLVALNWLYCGNGQLLLGAC
TQNQLQVYSQQRCGGQTLLNSGKLLKKDIWVCIASTRTFPPIYDFFWGPRATAVFVHNSY
FRVNSQWLFPINKKHLANANPNCPDYLGRMEEDIDSMVFIDCGLDQFKKILLGDSRRDCK
SGIPLEIDLKKDYLSSSLFLARAQLKCGSATKLGLWNMHEVIDKLNGSLPVYHPEALFMN
IYSGNWKRAYIALRHLNEFLSSNSSPERKYSPAKYSICVPQIPLSSFFDARISVYSNDRG
FQWSGDVSVVTSSSQFQRNLDQFTYSLDSYASSNQLNSSSTKTELSDFVEPFEKLYKSAA
ISDMEKIQILSIIDLLIEMTNSHSGSAYESLDESGRRFWVALRFQQLHSFRKHGRLASVE
ELVVDSKLIGWAYHSDCQENLFGSFLPNDPSWQEMRNLGIGFWFTNTAQLRSRMEKLARL
QYLKRKDPKDCALLYIALNRIQVLSGLFKISKDEKDKPLVGFLSRNFQEEKNKAAALKNA
YVLMGRHQLELAVAFFLLGGDTSSAVNICAKNLGDEQLALVICRLVEGRGGPLERHLITK
FMLPFAIEKDDYWLASLLEWELGNYSQSFIRMLGFQINSATEKHALSSNGVAFSDPNVGL
YCLMLATNNCMRNAVGEQNIAILGRWAILMTATALNRCGLPLEALEYLSSLPTIPGDTYE
RGMSDLGHSENLHAILNPSPRNSFNWLSSYVAVNLEFQAKLDLTLQYLSKLVGEHPSWVD
IAFGSSEASTCVKEYENHEYVKALESFQQKLYTAVHLLEQKFSVVPFHLISLILISLQDR
GLWFVGFDILHGYASQHQELDKSQTVDRFLSYALMHKPLLKATRETSLLFSRVIAACGIT
CSILKSHYIENNVPSDSRSMRSDSLGYYFQGLTLLLWSLRAALRIALFSSTEDLTMKPLA
IIDLIEYYVQLAYAWHCKNSKVLFLLVQPLMITFTNGHTPYEVDMMTLKKLLPQIREVVA
QNVSTDNVGLQVSQDRNITHSIPEDERWQIIGACLWQHISRLMKHKLNMLPYKLDDGCFS
GIPDRKHFSRLPSSANLQSDSNGVNELVELVSLSLLNLLKPTLAHVSSYYVKQLASLLQH
KLDYGLHVRTLVWLEESNQSQTRALNQHLNQDIIKLDMIDERHESDMLWVTCADPKMISE
SFAEEKINWSHSLDRKPSKGWSNICRGITTVDETEEIPNHEVSLNSSSASTEAGSPAKSI
FRGGHSFLGAWQKDTTLTKEVVPFLNPKEIYKRNGELLEALCLNSIDQRQAALASNRKGI
LFFNWKDDMPFGDHSDYIWSEADWPLNGWAGSESTPAPTCVSPGVGLGSKKGAHLGLGGA
TVGVGSLARPGRDLTGGGAFGIPGYAGMGASGLGWETQEDFEELVDPPATVENANTRAFS
SHPSRPFFLVGSSNTHIYLWQFGKDKTTATYGVLPAANVPPPYALASISALQFDHCGHRF
ATAALDGTVCTWQLEVGGRSNIGPRESSLCFNSHASDVAYVTSSGSIIAVAGYSSSNVNV
VIWDTLAPPTTSRASILCHEGGARSLSVFDNDIGSGSISPLIVTGGKGGDVGLHDFRYIA
TGRSKRHRHLDKGEQVMKTSSNIDMHPGNGTKLGEQNQNGMLWYIPKAHSGSVTKISIIP
NTSLFLTGSKDGDVKLWDAKRAKLVYHWPKLHERHTFLQPSTRGFGGVVQAAVTDIKVVS
HGFLSCGGDGTVKLVQLKDHQHQT
NT seq
7635 nt
NT seq
+upstream
nt +downstream
nt
atgccagacgtagacataccgtcagccgtggaccccactcaccaccttcctctccaattc
cttccatccgacccaactcctcccgccccgatccgatccgatccacccggatgcaccctc
gactggctgccggactttctagacctctcatgggtcgcctacggagcctcctcactccta
gtgatctcccacttcccctccccactctccgatgacgaaactgtaataggacccattgtc
cgtcaaatcttcgagctctccggcgacccctcgtctgcagtcgaagccgtctcgtggtcc
ccgtccacgccctcgatcggtgagctagctgccgcggctgagaattgcgtttgggtgttc
tcgcatgattcggccaggtccaaaggttctttttgttggagccagaatgcagtacttgta
caatctacaaaggtcgaggcaatgagatggacgggctcaggcgatggaattattgccggt
ggaattgatgtggttttgtggaaaagaaatggcaggtcttgggaaattgcttggaagttt
aaagcagacatgccacaaagtatggtctctgcaacttggtctgttgaaggaccttttgca
actgcagcttatcagactgaaggattgttgaccaataaggctagcaaatgtgtgctagta
tgccaaagtgttggaaaatctggttttttgaaatccgagctacatcatcctcatcctatc
tcaatgattcagtggaggccattaacaggaagtttaaatagagatgcaaaacatccaccg
aggcaagtgttactcacgtgtagcacagatggaactgcaaggttatggtgcgaggttgat
gatggaaggggaagaaaagttggtaaggacattaatgaccacaaaacaatgaggtgttca
ttttttgtagccgctgtaattgagataaatcaggcactgaatgggattcttggcactgat
atatatcttatgtgggccacagaaattgggggtgtgcacaaaaatagtgagggagctaaa
caaattttctttggaaaaggttatgagcaagatcaacccggtaactgtgagtggttaatt
gggtctggccctggaatgttggtcaatttctgggctatacactgtcttgatgatgtctcc
ccaataagatttccgcgggtcagcttatggaagacacaaaaactacaagggctaaaaggg
ggactttctgattgtaaagatggaatacctcttaataaagttgttatctcaaggaactgc
ttgtctagtccaccaacattatgttcgtttgttcagttattaccttgtaattccttggtt
tggtcacaattatatacacaaacttcaaataatgccgaggatatatcccttaataaatct
ggtacggagaacatcttatcatgttcagctggtggactcttgaatttggatggtcatgct
ggaagaatcttacaagtagctgtgcatccttatagctgcgaagttgaattggctgtctct
ctagattcttgtggactacttctattttggtttttttctaccatttccaactgcattttg
ggccgtccaacactaattccaacatgggagctttgtgggaaacttgtaacacaaggctca
tgttccaaatatacaagcttgaggtgggcaccgtcaatagtaaatgaagcagttgttctt
cttatgggacatgctggaggcgttgattgctttgttgtaaaattccatcataatgaggaa
gaaagtatagaatgtcactacttatgcacaataccttttacaggtcatggtccgtatgag
aatggtcccactagtatcttttcaattcctttgccttcgacttgtcataaaaccctaaaa
tctaataaatttatgcttttgggtgtatggatgaatgggtttcaggctctttcttgggaa
atcaccttgcattcttttgatttatcaagaagctactgtgagtgtaaatttgatgctgga
agtgctcctgaatgcagtatgtggggatttgaaactacttttgccaatgaaagatattgt
cttaatataaaaccttgctcgtcaaagataccagatcctcacgcgcatgatgatgtttca
agttttgctgtggtctgtccgggtaaattgatctgtatagaaaaaagtttggcttctact
attgatcgctgctgtcctccatatatactggctacaggctgctctgatggtagcttgaaa
ttgtggaggagtaacatggataagccatcaacgcctcaaattccatgggaacttgtgggt
atgttagtggcacatcaaggacccattagctctatatgcttatcagattgtggtcgtaag
atagcaaccatctgcaaggagcttccttcaaatactgttagcactcttcgtatatgggac
cctgtactccttgcagatgcagggacttttatgttagaagatacattatcctttggtcaa
gatcttgttgctttaaattggctatactgtggaaatggtcagttactgcttggagcctgc
acacagaatcagttgcaagtatattctcagcagcgttgtggtggtcagactttattaaac
tctggaaaattattgaaaaaggacatctgggtttgcattgcgtctactcgtactttccct
cccatttatgacttcttttggggccccagagcaactgctgtatttgttcacaatagttac
tttcgtgtaaatagtcagtggctgttccctataaataagaaacatcttgctaatgccaat
ccaaattgcccggattatttgggtagaatggaagaagatattgattctatggtgttcatt
gattgtggacttgatcaattcaagaaaatattacttggtgacagtagaagagattgcaag
tctggtataccattggagattgacttgaaaaaggattatctgtccagcagcttgttttta
gcaagggctcaactgaagtgtggttcggctaccaagctaggtttatggaacatgcatgaa
gtgatcgacaagttaaatggatctctgccagtttatcacccagaggccctctttatgaat
atctattcaggaaattggaagcgcgcttacattgctctcaggcatcttaatgaatttctc
tcgtctaattcttctcctgagaggaagtatagccctgcaaagtatagcatttgtgttcca
caaattcctttgtcaagtttttttgatgcacgtatctcagtatattcaaatgacagagga
tttcaatggagtggtgatgtttctgtagttacttcatcttctcagtttcaaagaaacttg
gaccaatttacatacagtttggactcatatgcttccagtaatcagttgaattcatcctca
acaaaaactgaacttagtgactttgttgagccttttgagaagttatacaagtcagcggct
ataagtgacatggagaagattcaaattctttctattatagatcttcttattgaaatgact
aattcacactctggttctgcatatgaaagtcttgatgaatctggacggaggttttgggtt
gcattgaggtttcagcaactacattctttcagaaagcatggtagattggcatctgtggag
gagttggttgttgactccaagttgattggatgggcctaccactctgattgccaggaaaac
ttatttgggtctttcctacctaatgatccatcttggcaagaaatgcggaatctgggtatt
ggattttggtttacaaatacagcacaattgcgttcaaggatggagaaactggcaagattg
cagtatctaaaaaggaaagatcctaaagattgtgcattgctatacatagcactaaataga
attcaagttttgtctggccttttcaaaattagcaaggatgagaaggataagccccttgtt
ggatttctttcacgtaattttcaggaggagaaaaataaggcagctgctttgaagaatgca
tatgtcttaatggggagacatcaactggaattagctgttgctttctttctgcttggaggt
gatacttcttctgctgtcaatatttgtgcaaagaaccttggtgatgaacagcttgcgtta
gtgatttgtcggcttgttgagggacgtggtggaccactagagagacacttaattacaaag
tttatgctaccatttgcaattgagaaggacgattattggttagcaagccttttggagtgg
gagctggggaattactctcaatcttttatacgcatgcttggtttccaaataaattcggca
actgagaagcatgcactttcgtccaatggtgttgctttctcagacccaaacgttggtctg
tattgtctaatgctagcaaccaataattgcatgaggaatgctgttggggagcaaaatatt
gcaatccttggcaggtgggcaatattgatgacagctaccgcgttaaacagatgtgggctt
cctcttgaagctttggagtatctttcatctctgccaaccattcctggggatacatatgaa
aggggtatgtcagatcttgggcattctgaaaatctacatgcaattctaaatccttctcca
agaaattctttcaattggttatcaagttatgtggctgtcaatctggagtttcaagccaaa
ttagatttgacacttcaatacttatcaaagttggtaggagagcatccaagctgggtagat
attgcttttggatcttctgaagctagtacatgtgtaaaggaatatgaaaatcatgaatat
gtaaaagctcttgaatctttccaacagaagttatacacggcagttcatctgttggagcag
aagttttcagtggttcccttccatcttattagcctgattttaatatcgctgcaagatcgt
gggctatggttcgttggatttgatatattacatggatatgcttctcaacatcaagagcta
gataaaagccaaacagttgacagattcttatcatatgctcttatgcataagccacttttg
aaggctaccagagaaacttcccttttgttttcacgcgttattgctgcctgcggtataact
tgctctatactgaagtcacattatattgaaaacaatgtgcctagcgatagtagatctatg
aggtcagattcattggggtattactttcaaggtcttacactgttattgtggagtttaagg
gctgctttgagaattgccttgttctcctcaactgaagatctcaccatgaaaccccttgca
atcattgatttgattgagtattatgtacagcttgcatatgcttggcattgtaaaaactca
aaagttctctttctattggtgcaaccccttatgatcacatttactaatgggcatacacct
tatgaagttgatatgatgactctcaagaaactccttccccagattcgagaggttgtggct
caaaatgtttctactgataatgtaggtcttcaggtttctcaagatagaaatataacacat
tcaattccagaagatgaaagatggcaaatcataggtgcttgtttatggcaacacatatcc
agactcatgaaacataagttgaatatgttgccctataaacttgatgatggttgtttttct
ggtatacccgatagaaaacatttttcacggctacctagctctgcaaatttacagtctgat
agcaacggtgtaaatgaactggtagaactggtgtccttgagcttgcttaacttactgaag
cccacacttgcacatgtttcttcttattatgtaaaacagctagcatcacttctacagcat
aaattggattatgggttgcatgtaaggacccttgtttggttagaagaatctaaccagtct
caaaccagagccctcaatcagcatctaaatcaggatattatcaaattggacatgatagat
gaaagacatgaatctgacatgttatgggttacctgtgctgatcctaaaatgatatctgaa
agttttgccgaggaaaaaataaactggtctcactctcttgatcgtaaaccctctaaagga
tggagtaacatatgtagaggcattacaactgtagatgaaactgaggaaattcccaatcat
gaagtgtcacttaacagtagttctgccagtactgaagctggatctcctgctaaaagtata
tttcggggtggccattctttccttggtgcctggcagaaagacacaacccttacaaaggag
gttgtgccttttctaaacccaaaagagatatataagagaaacggggagcttttggaggca
ttgtgtctcaactccattgatcagagacaagctgcacttgcaagcaaccgaaagggaata
ttattttttaattggaaagatgatatgccttttggagatcattcagactatatctggtca
gaagccgattggccactgaatggatgggctggttctgaatcaacccccgctcctacgtgt
gtttctcctggtgttggtcttggaagcaagaaaggagcacaccttggactgggtggagca
actgttggtgtgggctctttggcaaggccgggaagagatttgacgggtggtggagcattt
gggattccaggttatgctggtatgggtgcgtctggtttaggttgggaaactcaagaggac
tttgaggagcttgttgatccaccagctactgtagagaatgcaaatacaagggctttttcc
agtcacccgtctagacctttcttcttagttggttctagcaatacacacatttacttatgg
cagtttggaaaggacaaaactactgcaacttatggagtgctgcctgctgcaaatgtccct
ccaccttatgctcttgcatctatatcagctttgcagtttgaccactgtggacatagattt
gctactgctgccttggatggaactgtatgcacatggcagctggaggtgggaggaaggagt
aacattggtcctagagagtcatctctatgctttaacagccatgcatccgatgttgcgtat
gttacttcaagtggatcaatcattgctgttgctggatatagctccagtaatgttaatgtg
gttatatgggatactttggctccacctaccacctcacgggcttctatcctttgtcatgaa
ggtggtgcacgctctctttctgtgtttgataatgacataggaagtggctctatctccccc
ctgattgtgactggcggaaaaggtggtgatgttggacttcatgatttccggtacattgct
actggaagaagtaaaaggcatagacatttagataaaggtgaacaagtcatgaagacatca
tcgaatattgatatgcatcctgggaatggtaccaagcttggggaacaaaatcaaaatgga
atgctttggtatataccgaaggctcactcagggagtgtcaccaagatatctataatccca
aataccagtttgttcttaacgggaagcaaagatggagatgttaagctttgggacgccaag
agagctaagttggtatatcactggccgaaattgcatgaaaggcacacatttttgcaacca
agcactcgaggctttggtggtgtagtccaggctgctgtcacggatataaaagttgtctca
catggttttctctcatgtggtggagacggaactgtaaagctggttcaactgaaagaccac
caacatcagacatga
DBGET
integrated database retrieval system
