Prunus avium (sweet cherry): 110757786
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Entry
110757786 CDS
T05161
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110757786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110757786
03036 Chromosome and associated proteins [BR:
pavi03036
]
110757786
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110757786
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110757786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
110757786
NCBI-ProteinID:
XP_021815196
UniProt:
A0A6P5SNL4
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MFGSTNPAFGQSSSSPFASQPVFGQTSNTNNNPFVPKPFGSTTPFGAQTGSSIFGGTSTG
VFGAAQSSSPFPSSTTFGASSSPAFGNTTPAFGAASSPAFNSSPSPFGGSSGFGQKPVFG
AFGSNTTQPSPFGSTTQPSQPAFGSGIFGSTTPFGGSSQPAFGATTTPAFGGTSSPAFGA
TSTPAFGATSTPAFGATSTPAFGATSTPAFGATSNPPAFGATSTPPAFGATSSPAFGSTT
SPTFGNTGSAFGVSNSSVFGSTGAFGASSTPAFGSSGSTFGTSSNPGFGASSAPGFGSSS
TPSFSFTSAPAFGQSNSTFGSASSPFGAQSSPFGAQPTPLGNNTFGQSGFGGQQRGGSRV
AAYTETPEPDGGSGATAAKLESISAMPVYKDKSHEELRWEDYQLGDKGGPAPAGGSGFGM
SAAQPNSLNTASSFPQASTSPFNTATAPNLFTPKTPSFPSTGFGTSSTPFSSSSFGLSTS
TNIFTPSSSPSGFGQTSSPSLFTSSAPSTFSFSAPAQTSNSTFNTGIFNSTAPVAQTGST
FGLSTTSFGQNTTPFGQSNAFNTPSTGYGLGSSSTASATSNLMGFSQPTPSFPTPFQPSQ
PPQNSGFGFNSFSQIQPGNTGGLGGSAGILGQNNFGQLSATQSSAAVQPVPATNPFGTLP
AMPQMSIGRGGTAPSIQYGISSMPVVDKLAPARMSSSLVTSRHLTQRRVRLPVRKYYPKN
DDQRFPFFIDDEETVNTPKADALFLPRENPRALVIRPKEQWPRRASAEKASPLKDTSTPV
HENGKNMGEACNPFLGCSNSEDKEIPHEDGIVKERVNHVKANQKPNGVHDDHSIQKGDSY
MTLSGHRAGEAAIVYEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCCHVKDFV
VGRVDYGSIKFFGETDVRRLDLESVVQFNNREVIVYMDDNKKPPVGQGLNKPAEVTLLNI
TCMDKKTGRRFTEGPKTEKYKQMLKKKAEDQGAEFVSYDPLKGEWKFKVSHFSEYKLGDE
DDWDVNGAQDC
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctactaacccagcttttgggcagtcatctagcagcccgtttgcatcccaa
ccggtctttgggcagaccagcaacacaaataacaatccttttgttcccaagccttttggt
agcacaactccgttcggtgcccaaacaggtagttccatatttggcggcacttcaactggt
gtatttggtgcagctcaatcttcttcaccttttccttcctcaacgacctttggtgcttca
tcctcaccagcttttggaaatacaactcctgcttttggagcagcttctagtccagctttc
aatagttcaccatcaccgtttggtggttcatctggttttggtcagaagcctgtttttgga
gcatttgggtccaatactactcaaccaagtccttttggaagcacaactcagccatcacag
ccagcatttgggagcggaatatttggttccaccacaccatttggtggatcaagtcagcca
gcatttggtgctaccaccaccccagcctttggtggtacaagtagtccagcctttggtgct
acgagcaccccagcctttggtgctacgagcaccccagcgtttggtgctacaagcacccca
gcatttggtgctacaagtaccccggcctttggagctactagcaaccccccagcctttggg
gctactagcacccccccagcctttggggctacaagcagtccagcctttggttccacaaca
agtcctacgtttggaaacacaggatctgcattcggggtgtcaaattcctccgtgtttgga
tctacgggagcatttggggcttcaagcaccccagcttttggttcatctggatccaccttt
ggtacttcaagcaatccaggttttggtgcatcaagtgctcctggttttggttcatccagt
actccatctttcagctttacatcagctcctgcttttggccaatcaaattctacatttggt
agtgcctcatctccatttggagcacagagttctccattcggagcgcagccaacaccattg
gggaacaatacctttgggcagtcaggttttgggggccaacaacgtgggggtagtagagtg
gctgcatatacagaaactccagaaccagatggtggtagtggggctactgctgcaaaattg
gagtcaatatcagcaatgccagtatataaagacaaaagtcacgaagaacttcgctgggag
gattatcaattgggagataaaggtggtccagctcctgctggtgggagtggctttggcatg
tctgcggcacaaccaaactctttgaatactgcatcatcatttcctcaagcatctacaagt
ccttttaataccgcaactgcaccaaatttgtttactccaaaaactccatccttcccttct
accggctttggaacatcgtctactccattcagttcatcatcttttgggctttctacttca
accaatatttttaccccatcatcatctccttcgggttttggacaaacctcatctccgtct
ctctttacttcatcagcgccatccacattttcattttctgctccagctcaaacatcaaat
tccacatttaatacgggaatattcaattccactgctccagttgcacagacaggtagtact
tttggactaagtaccacttcgtttgggcagaacacgactccatttggtcaatcaaatgca
ttcaatactccctctactggctatggtttggggagctcctctacggctagtgctacaagc
aacctgatgggttttagtcaaccaactccttcttttcctacgcctttccagccatctcaa
cctcctcagaacagtgggtttggattcaacagttttagtcaaattcagccaggcaataca
ggtggcttgggtggttcagcgggaattcttgggcagaataactttggacaattgtctgct
actcaaagctctgcagctgtacaaccagtacctgctaccaatccatttggaacgctccct
gcgatgcctcagatgtcaattggtcgtggtggaactgcaccatcaattcaatatgggatt
tcaagcatgcctgttgtagacaaactggcgcctgctagaatgtcatcatctttagtgact
tctcgacacctgactcaaaggcgggtcagattgcctgtgagaaaatattatcctaagaat
gatgatcaaaggttccctttctttattgatgatgaagaaacagtcaatacccccaaggcg
gatgctcttttccttcccagggaaaacccaagagcactcgtcattcgtcccaaagaacag
tggcctcgaagggccagtgctgagaaagcatccccattaaaggatacttctactccggtg
catgagaatggaaaaaatatgggagaagcatgtaatcccttcttaggttgctccaattct
gaggataaagaaattccacatgaagatggcattgtcaaagagcgtgtgaatcatgtcaaa
gccaaccagaaacctaacggagtccatgatgatcattctattcagaaaggggactcgtat
atgacactgagtgggcatagagccggtgaggctgctattgtatatgagcatggcgctgac
attgaggcactaatgccaaagctccggcgctctgactactatacagagcctcgaatccag
gaattggcggcgaaggaaagggcagaacctgggttctgctgtcacgtcaaggactttgtg
gtcggacgagttgactatggtagcatcaagttctttggtgagacagatgtgagacgcctt
gatctggaatccgtggtgcagtttaacaatcgggaggtgatagtgtacatggatgacaac
aagaaacctcctgtcgggcaaggcctcaataaacctgctgaggtaacacttctcaacatt
acatgcatggacaaaaaaacagggcgccggtttacagaagggccaaaaactgaaaaatac
aagcagatgttgaagaagaaagcggaggatcaaggtgcagagtttgtctcatatgacccc
ttgaaaggagagtggaagttcaaggtaagccacttcagtgagtacaagttgggagatgaa
gacgactgggatgtgaatggtgcccaagattgctga
DBGET
integrated database retrieval system
