KEGG   Prunus avium (sweet cherry): 110757905
Entry
110757905         CDS       T05161                                 
Name
(RefSeq) putative CCR4-associated factor 1 homolog 4
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110757905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110757905
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110757905
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     110757905
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 110757905
NCBI-ProteinID: XP_021815350
UniProt: A0A6P5SEL3
LinkDB
Position
Unknown
AA seq 241 aa
MSSSWRYYPRLFCGEIVLARVAKILDVERSNEAQQAGSYSLLTINVFSKMNTMFRFVDGM
SQDALKNQNYQDVKFNVDSFKLIQLGLTLSDAHGNNEGTSEFNFYGFNENSNPYILVSIS
LLKRNALDFQKMGNFGNSVENFVVRFLHVLKMNKELHHLKWVVLGDIYDVKFMARYYLRL
FCCEIVLARVAKILDVERSNEAHQASSYSLLTADVFSKMNTMFNLWLGCPKVVCMELPQQ
S
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtcaagttcatggcgctactacccaagattattttgcggtgaaattgtattggcaagg
gtggctaagattcttgatgtggaacgttctaatgaagctcagcaagctggttcgtatagt
ttgttgactatcaatgtgttttccaagatgaacacaatgtttaggtttgtggatgggatg
tctcaagacgcacttaaaaatcaaaattatcaagatgtcaaattcaacgttgattccttc
aagttgatccagttgggtctcactttgtccgatgcccatggcaataatgagggcacctcg
gaattcaacttttatggattcaatgagaattctaacccctatattctagtttctatttct
ctactcaaaagaaatgctcttgattttcaaaaaatggggaattttggaaattctgttgag
aattttgtggtcaggtttttgcatgtcctgaaaatgaacaaggagctgcatcatctcaaa
tgggtagtccttggtgacatttatgatgtcaagttcatggcgcgctactacctaagattg
ttttgctgtgaaattgtattggcaagggtggccaagattcttgatgtggagcgttctaat
gaagctcatcaagctagttcgtacagtttgttgactgccgatgtgttttctaagatgaac
acaatgttcaatttgtggttgggatgtcccaaggttgtttgtatggaattaccccaacaa
tcgtaa

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