Prunus avium (sweet cherry): 110757959
Help
Entry
110757959 CDS
T05161
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110757959
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110757959
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
110757959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
DEXQc_Suv3
T2SSE
Motif
Other DBs
NCBI-GeneID:
110757959
NCBI-ProteinID:
XP_021815403
UniProt:
A0A6P5SNU7
LinkDB
All DBs
Position
Unknown
AA seq
2088 aa
AA seq
DB search
MLVQLPRLTSSLREPFDIDQAYLQRKLILQSQKPRQSSSSVDESELARKIVYRWEEASVE
VRQAYKQFTGAVVELIDGEVPSEEFREVALTVYHLFGRPEEEDNVETNIAGKKLEVQKLL
GHAVSDANVQKVASLAQRLAGMQSSDKGTTLVSERPVNGTHDNVEFGADLVFHAPARFLV
DVSLEDGELLGEESTGISSSYYEGLYSRSNLNDHHPSTDGQSFNLSWLKDACDQIVTKSS
SQLSRDELAMAICRVLDSDKPGDEIAGVLLDLVGDSAFETVQDLVSHRKELIDAIHHGLL
GLKSDKLSSSQSRMPSYGTQVTVQTETERQIDKLRRKEEKRQRRGTEYGTDSELAAVNFS
SLLQASERKNPVDDLLALGEGPQSLAVSALPQGTVRKHHKGYEEVIIPPTPTAQMKPGEK
LIEITELDEFAQAAFRGYKSLNRIQSRIFHTVYYTNENILVCAPTGAGKTNIAMISILHE
IGQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNMTVRELTGDMQLSKNELE
ETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVES
TQTMIRIVGLSATLPNYLEVAQFLRVNPEAGLFFFDSSYRPVPLAQQYIGISEQNFTARI
ELQNEICYKKVVESLRQGYQAMVFVHSRKDTAKTAQKLVELARKFEGLEYFKNDEHPQFS
LIQREVMKSRNKDLVALFEFGVGVHHAGMLRTDRGLTERLFSDGLLKVLVCTATLAWGVN
LPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYL
RLLTSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLVYGIGW
DEVVADPSLSLKQRALIADAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVET
YNEMLRRHMNETEVIDMVAHSSEFENIVVRDEEQNELETLVRSSCPLEVKGGPSNKHGKI
SILIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRKGWSEMSLFMLEYCKAVD
RQVWPHQHPLRQFDRDLSAEIVRKLEERGADLDRLYEMQEKDIGALIRYAPGGRLVKQYL
GYFPWIQLSATVSPITRTVLKVDLVITPDFIWKDRFHGTAQRWWILVEDSENDHIYHSEL
FTLTKRMSKGEPQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYTISFQNLALPEASTS
HTELLDLKPLPVTSLGNSIYEALYKFSHFNPIQTQTFHVLYHTDNNVLLGAPTGSGKTIS
AELAMLRLFNTQPDMKVIYIAPLKAIVRERMNDWKRRLVSHLGKKMVEMTGDYTPDLMAI
LSADIIISTPEKWDGISRNWHSRAYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYISS
QTEREVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRM
NSMNKPAYAAIGTHSPTKPVLIFVSSRRQTRLTALDLIQFATSDEHPRQFLSMPEEALQM
VVSQVTDNNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAH
LVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLY
EPFPVESSLREQLHNHINAEIVSGTICHKEDALHYLTWTYLFRRLMFNPAYYGLDNTEPE
VLSSYLSRLVQNTFEDLEDSGCIKMNEDNVEPTMLGSIASQYYLSYMTVSMFGSNIGSDT
SLEVFLHILSAASEYNELPVRHNEENYNEALSERVRYKVDKDRLDDPHVKANLLFQAHFS
QLELPISDYVTDLKSVLDQSIRIIQAMIDICANSGWISSSITCMHLLQMVMQGLWFDRDS
SLWMMPCMNVELADSLSKRGIFSVQQLLYLPKATLQTMIGNFPASKLYQDLQPFPRIEVK
LKLQQKDSGKSHSLDIRLVKTNFRQNKSRAFTPRFPKVKNEAWWLVLGNASTWELYALKR
VSFSDHLVTHMELPSAPNTLQGMKLTLISDCYVGFEQEHSISELIQRQ
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgttggttcagcttccgcgcctgaccagctctctcagagagccctttgacatcgaccag
gcctatttgcagcgcaagctcatccttcagagccagaagcctcgccagtcttcgagctca
gttgatgagtcagagcttgcacggaagatagtttatagatgggaagaagcttcggttgaa
gtgcggcaagcttacaagcagtttactggggctgtggtggagttgatagatggagaagtt
ccatccgaagagtttcgtgaggtggcactgaccgtgtaccatctttttggcaggccagag
gaggaagacaatgttgaaacaaatattgccggaaaaaagctggaagtgcaaaaactactt
ggtcatgccgtttcagatgctaacgtgcagaaagttgcctccctagcccagagacttgca
gggatgcagtccagtgataaggggactacacttgtttcagaaaggcctgtaaacgggact
catgacaatgtggaatttggtgctgaccttgttttccatgcaccagctcgatttctggtg
gatgtttctttggaggatggcgagttattgggtgaggaaagcactggaatttcttcttca
tattatgaaggattatatagtcgcagtaacttgaatgatcatcatccttctactgatgga
caaagcttcaatttgagttggttaaaagatgcatgtgatcagatagtaacaaaaagtagt
tcgcagctttcccgagatgaactggctatggccatttgtcgggtgcttgactctgataaa
cctggtgacgagatagcaggtgtcttgttagatcttgttggggatagtgcatttgaaact
gttcaagacctcgtatcacatcgaaaggaacttattgatgccatccatcatgggttactg
ggactgaaatctgacaaattgtcaagctctcaatcacgtatgcctagttatggcacacag
gttactgttcaaacagaaactgaacgacagattgataaacttcggcgcaaagaggaaaag
cgacaaagacgaggaacagaatatggcactgatagtgaactggctgctgtaaatttttct
tctttactacaagcaagtgaaagaaaaaatcctgttgatgatctcttagcgcttggtgaa
gggcctcaatctttagcagttagtgctcttcctcaaggaactgtgaggaagcatcataag
ggatatgaggaggtcattattcccccaacaccaacagcacaaatgaaacctggagaaaag
ctgattgagataacggagttagatgaatttgctcaagctgcttttcgtggatataagtct
ctgaaccgtattcagagccgcatatttcatactgtttattacactaatgaaaatatacta
gtttgtgctccaacaggagctggcaaaacaaacatagctatgatttctattctacatgag
attggacagcacttcaaagatggttacttgcataaagatgaatttaagatagtttatgtt
gcaccaatgaaggcattagctgcagaagttacatcaacttttagccatcgcttatctcca
ttgaatatgactgtgagagaacttactggagacatgcaactttctaagaatgaacttgaa
gaaactcagatgatagtcacaacacctgagaaatgggatgtcattactcgcaagagcagt
gacatgtcactttcaatgttggtgaagctcctaattattgatgaagtgcatcttttaaat
gatgatagaggccctgtaattgaggcactagttgctcgaactttgcgccaggtggagtct
acacagacaatgatacgcattgtgggcctttcagccactctaccgaactatttagaggtt
gcacagtttctgagagtgaatccagaagcaggactcttcttctttgattctagttatcgc
ccagtgcccctcgcacagcagtatattggtattagtgagcagaattttacagcccgtatt
gaattgcagaatgagatatgctacaagaaggttgttgaatcactcaggcaaggttatcag
gcaatggtattcgttcattctcgaaaggacacagcaaaaacagctcagaaattggttgaa
cttgctcgcaagtttgaaggactggagtattttaagaatgatgaacacccacaattttcg
ttgatccagagggaagttatgaagtccagaaacaaagatcttgttgcactttttgaattt
ggagttggagttcatcacgctgggatgttacgtactgatagagggctgactgagcgcctt
ttctctgatggactgttgaaggtacttgtttgtacggcaactttggcatggggtgtaaat
ctaccagctcatactgttgtgataaaggggactcaattatatgatccaaaggctggcggt
tggcgagacctgggcatgctagatgttatgcagatatttggacgggctgggagacctcaa
ttcgacaaaagtggtgaaggcattataattacatctcatgacaaactggcctactatttg
cggttgctgacaagccaacttcctatagaaagtcagtttattacttccttgaaagacaat
ttaaatgcagaggtggcacttggtactgtcaccaatgtcaaggaagcttgtgcatggctt
ggatatacgtaccttttcataagaatgaggctgaaccctttggtgtatggtattgggtgg
gatgaggttgttgctgatccttccttgagtttaaagcaaagagctctcatagcagatgct
gcacgtgccctggacaaagcaaaaatgatgcgctttgatgagaaaagtggcaacttttat
tgtacagagcttggtcgaattgcaagccacttttatattcaatactcaagtgttgaaaca
tacaatgaaatgttgagacgccacatgaatgagactgaggtaatagacatggtagcccac
tcttctgaatttgaaaatattgttgttcgagatgaggaacagaatgagctagagacgttg
gtgcgatcatcgtgcccattagaagttaaggggggtccttcaaataaacatggaaagata
tccattctcattcagttgtacatatctcgtggctcgattgataccttttcgttggtttct
gatgctgcatacataagtgcaagcttggcacgcattatgcgggcattattcgagatttgt
ctacgaaaaggctggtctgagatgtcactgttcatgttggaatattgcaaggctgtggat
cgccaagtttggccccatcagcatcctctcagacaatttgacagagatctttcagcagaa
atagtgcgaaagcttgaagaacgaggggctgacttagatcgcctatatgagatgcaggaa
aaagacattggagcactgattcgctatgcacctggaggaaggttggtcaagcaatatttg
ggatattttccatggatccagttgtcagcaactgtaagtccaatcaccagaactgtttta
aaggtggatttggttattacaccagactttatatggaaagatcgttttcatggcacagcc
cagcgttggtggattctagttgaggattctgagaatgaccacatctaccactcagagctt
ttcactctgacaaagcggatgtccaaaggggaacctcagaagctttcgttcactgtgcca
atatttgagccacatccacctcagtattatattcgtgctgtttctgattcttggttgcat
gcagaggctttctacaccatatccttccagaatctagcactgccagaggctagtacttcg
cacacagaattgctagatttgaagcctctccctgtgacttcacttggcaacagtatttat
gaagcattgtacaaattttcacactttaatccaatacaaacacagactttccatgtcctg
tatcacacagacaataatgttctattaggagctcccactggaagtgggaaaactatatct
gctgagctcgctatgcttcgcctattcaatacccaacctgatatgaaggtaatttacata
gcacctttgaaggctattgttcgggaaagaatgaatgattggaaaagacgtcttgtctct
cacctagggaaaaagatggttgaaatgactggagattatactccagatttgatggccata
ttgtcagcggatatcataatatctactcctgagaagtgggatggtatcagtcgtaattgg
catagtcgagcctatgttaaaaaggttgggcttatgatcttggatgagattcacttgttg
ggagctgaccggggacccatccttgaggttattgtgtcaaggatgagatacatatcatca
cagacagagcgtgaagtacggtttgtaggcctttctacagctttagcaaatgcaggggat
ttggctgattggctgggtgttggggaaatcggactcttcaatttcaaaccaagcgtgaga
cctgtacctcttgaagtccatatccagggataccctggaaagttctattgcccaaggatg
aatagcatgaacaagccagcatatgctgcaataggcacccattcacctacgaaaccagtt
ttaatatttgtttcctctcgtcgacagacaaggcttactgcattggacctcattcagttt
gcaacatcagatgaacatccaaggcagtttcttagcatgccagaagaagccctacagatg
gttgtttctcaggtcactgataataacctgaggcacactttgcagtttggcattggatta
caccatgccggtctgaatgacaaagatagatctctggttgaggagctttttgcaaacaac
aaaattcaggtattggtttgtaccagcacattggcatggggtgtaaaccttccagctcat
ctggtcattattaagggaacagaatattatgatgggaaaacaaagagatatgttgatttt
ccaatcacagatatcttgcaaatgatgggtcgtgctggccgcccacaatttgatcaacat
gggaaagcagtcattcttgttcatgagcccaaaaagagcttctataaaaagtttttatat
gaaccatttcccgttgagagcagtctgagggaacagttgcacaatcacatcaatgctgag
atagtttctggcacaatttgccataaagaggatgcgttgcattatcttacctggacatat
ttatttcgaagactgatgtttaatccagcttactatggcttggacaatactgaacctgaa
gttctcagctcttatttgtctaggttagtgcaaaacacatttgaggatctggaagacagt
ggatgcatcaagatgaatgaagacaatgtagagccaacgatgctgggttcaatagcatcc
cagtattatcttagctacatgactgtatcaatgtttggttcaaacataggatcagataca
tcgcttgaagtcttcttgcatatcctatctgctgcttctgaatataacgaacttcctgtg
cggcataacgaggagaattacaatgaagcattgtctgagagagttcgatataaagtggat
aaggaccgcttagatgatccacatgtcaaagccaatctgctatttcaggcacatttctca
cagttagaattaccaatcagtgattacgtcacagacttgaagtcagtattggatcaaagt
atacgaatcatccaggccatgatagatatatgtgctaacagtgggtggatttcaagctca
attacttgcatgcatcttctgcaaatggtcatgcagggtttatggtttgatagggattct
tccttatggatgatgccatgcatgaatgttgaacttgctgactcgctaagcaaaagagga
atattcagcgtacagcaactattgtatctccccaaggcaactttgcagaccatgattgga
aattttcctgcttcaaaattgtatcaggatctgcagccttttccccgcatcgaagtgaaa
ttaaaacttcagcaaaaggacagcggaaagtctcactctttagacatcagactggtgaag
accaatttcaggcaaaacaaatcaagagcatttaccccgcgtttccctaaggtgaaaaac
gaagcatggtggttggtccttgggaacgcctcaacatgggaattatatgctctaaaaaga
gtatctttctctgatcacttggttactcacatggagttaccatcagctcctaatactctc
caggggatgaaattgactttaatttcagattgttatgtgggcttcgagcaagagcactct
atttcagagcttattcaacggcagtaa
DBGET
integrated database retrieval system
