Prunus avium (sweet cherry): 110757964
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Entry
110757964 CDS
T05161
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110757964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pavi04121
]
110757964
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110757964
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
LRR_4
F-box-like
LRR_8
F-box
Motif
Other DBs
NCBI-GeneID:
110757964
NCBI-ProteinID:
XP_021815420
UniProt:
A0A6P5SP60
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Position
Unknown
AA seq
585 aa
AA seq
DB search
MGSKRKKSDSPDPDEPNRVGSDFPDEVLEQVLGMVKSRKDRSSVSLVCKDWYDAERWSRR
QVFIGNCYSASPEIVTRRFRSIRSVTLKGKPRFSDFNLVPPNWGSDVQPWLEVFASEYPL
LEELRLKRMTVTDESLEFLAVSFPGFKALSLLSCDGFSTDGLAAIATHCKNLTELDIQEN
EIDDKSGGWLSCFPETFTSLEILNFASLNSDVNFDALEKLVRRCKSFKVLKVNKNVTLEQ
LQRLLTHAPQLLELGTGSFLQELTTCQNSQLERAFSSCNNLHTLSGLWEATALYLPALYP
ACTNLTFLNLSYSALQSWELAKLLAHCPRLRRLWVLDTVEDKGLEAVGSNCPLIEELRVF
PSDPYGDDIIHGVTESGFVAVSYGCRRLRYVLYFCRQMTNAAVATVVKNCPDFTHFRLCI
MNPGQPDHITNEPMDEGFGAVVKTCTKLQRLAVSGLLTDRTFEYIGEYAKNLERLSVAFA
GKSDWGMQCVLNGCPKLKKLEIRDCPFGNAALLSGFEKYESMRSLWMSACNVTMNACRLL
ASEMPRLNVEVMKDDGNDDDQADKVYVYRSVAGSRRDAPPFVLTF
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgaaaagaaaaaagtccgattcaccggacccggacgagccgaaccgggtaggg
tcggattttccagacgaggttttggagcaggtcctcggcatggtgaagtcccgcaaggac
cggagctcggtctcgctggtgtgcaaggactggtacgacgcggagcgctggtcccgccgc
caagttttcatcggaaactgctactcggcgtcgccggagatagtgacccggcggtttcgg
agcatccggagcgtgaccctgaaagggaagccccggttctcggacttcaatctggttcct
ccgaactggggcagcgatgttcagccttggctggaggtgttcgccagcgaatacccgctt
ctggaggagctgaggctgaagaggatgacggtgactgatgagagccttgagttcttggct
gtttcgtttcctgggttcaaagctctctcgcttctcagctgtgatgggttcagcacagat
ggcctcgcagccattgccactcactgcaagaatttgactgagctggacatacaggagaat
gaaattgatgataaaagtggcggatggctaagttgcttccccgaaactttcacatctttg
gaaatactgaactttgccagcctcaatagcgatgtcaatttcgatgctcttgagaaactt
gtacgcaggtgcaaatcatttaaggtgttgaaggttaataaaaatgtaaccttggaacag
ctacagaggcttcttacccatgctcctcagcttctggagctaggcactggctcatttttg
caagagctcaccacctgtcagaattcacaacttgaaagagcatttagcagttgcaataat
ttacacacgctctctggtttatgggaagcaacggccctgtatcttccagctctgtatcct
gcatgtacaaatctcactttcttgaatttgagttattctgctttgcaaagttgggaactt
gctaagcttcttgctcattgcccacgtctacggcgcctttgggtcctggacacagtggaa
gacaaagggttggaggctgtcggatctaactgtcctttgattgaggaactccgtgttttc
ccttctgatccttatggtgatgatattatccatggggtgactgaatctgggtttgttgct
gtgtcttatggttgccgaagactccgctatgtcctttacttttgtcggcagatgactaat
gcagctgtagcaactgttgtaaaaaactgccctgatttcacccactttcgtctctgtata
atgaacccagggcaaccagatcacataacaaatgagcccatggatgagggttttggtgca
gtggtgaagacttgcactaaactccaaaggcttgcagtttcaggtttattgaccgaccgc
acatttgaatacattggagaatatgctaagaatttggaaaggctttcagtagctttcgct
ggaaaaagtgattgggggatgcagtgtgtgctgaatggttgtccaaagctcaagaaactt
gagataagagactgcccattcgggaatgcagctttgctttcaggttttgagaagtatgaa
tctatgagatcactttggatgtcagcctgcaatgtgacaatgaacgcttgtcggctattg
gcaagtgagatgccaagattgaatgttgaggtaatgaaggatgatgggaatgatgatgat
caggctgataaagtctatgtttaccgttctgttgctgggtcaagaagggatgccccacct
tttgttctcactttctga
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