Prunus avium (sweet cherry): 110758000 Help Entry 110758000         CDS       T05161                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism pavi  Prunus avium (sweet cherry) Pathway pavi03040   Spliceosome Brite KEGG Orthology (KO) [BR:pavi00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     110758000  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pavi03019]     110758000    03041 Spliceosome [BR:pavi03041]     110758000 Messenger RNA biogenesis [BR:pavi03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      110758000 Spliceosome [BR:pavi03041]  Complex B   Other components    Prp19-related factors     110758000  Complex C     110758000 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_15 Mad3_BUB1_I TPR_19 ARM_TT21_C NRDE-2 ARM_TT21 Motif Other DBs NCBI-GeneID:  110758000 NCBI-ProteinID:  XP_021815466 UniProt:  A0A6P5SP92 LinkDB All DBs Position Unknown AA seq 921 aa AA seqDB search MSISQELYPSQDDLLYEEELLRNPFSLKLWWRYLIARSESPFKKRFIIYERALKALPGSY KLWNAYLRERLELVRNLPITHFQYETLNNTFERALVTMHKMPKIWTMYLQTLTEQKLVTR TRRTFDRALCALPVTQHDRIWDPYLKFVSQTGIPIETSLRVYRRYLKYDPTHIEDFIEFL INSSLWQEAAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTKHATEVSGLNVDAIIRGG IRKFTDEVGRLWTSLADYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYAGFEDSML VHKMETVDLSDEEEEEEKGVEEDGNEEEEDLRLDVNLSLAEFEKKMLNGFWLHDDKDVDL RLARLEHLMDRRPILANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMK AVGKPHTLWVAFAKLYENHKDIANARVIFDKAVQVNYKTVDNLASLWCEWAEMELRHKNF KGALELMRRATAEPSVEVKRRVAADGNQPVQMKLHKSLRIWTFYVDLEESLGKLESTRAV YERILDLKIATPQIIINYALLLEEHKYFEDAFKVYEKGTKIFKYPHVKDIWVTYLSKFVK RYGKKELERARQLFEDAVQAAPADAKKPLYLQFAKLEEDYGLAKRAMKVYDEATKAVPNH EKLSMYEIYIARAAEIFGIPKTREIYEQAIESGLPDKDVKTMCLKYAELEKSLGEIDRAR GVYIFASQFSDPRSDVDFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYM MQKDQRLNMDEAKDKLKQAGVPEDEMAALERQLAPVANGTTTKDSNRKVGFVSAGVESQT DGGIKVAANHEDIELPDASDSEDDEGVEIAQKEVPSAVFGELANKRKEAEKDEGGDGAAA TKDDDSHLGALERIKRLKRGG NT seq 2766 nt NT seq  +upstreamnt  +downstreamnt atgtcgatctctcaggaattatacccatcccaagacgaccttctttacgaagaagagctt ctccgaaacccctttagcctcaagctatggtggcgttacctcatcgctcgatccgaatct ccattcaagaagcgttttataatctacgagcgagcactcaaggcccttcctgggagctac aagctttggaacgcttaccttcgcgaacgcctcgagcttgttcgcaatttacccatcact cacttccagtatgaaaccctcaacaacacttttgaaagagccctggttactatgcacaaa atgcccaaaatttggactatgtacttgcaaactttgacggagcagaagttggtcactcgg actcgccggaccttcgacagagcgctgtgtgctcttcctgtgacgcagcacgaccgcatt tgggacccgtacctgaagttcgtgagccaaacgggtatcccaattgagacctcgcttcgg gtttatcgcaggtatttgaaatatgaccctacccatattgaagatttcattgagttcttg ataaattctagtctttggcaagaggccgccgagaggctggcttcagtgttgaatgatgat cagttttattcgataaaggggaaaacgaaacataggctgtggctggaattgtgtgatttg cttactaagcatgctacggaggtgtcaggcctcaatgtagatgctattattagaggtggg attaggaaatttacagacgaggtgggacggttatggacctcactggcggactattacatt aggaggaatttgcacgagaaagctagggatatatttgaggagggtatgactactgtggta accgtaagagattttagtgtaatttttgattcttatgctgggtttgaagatagtatgctt gtccataagatggagacagtggatttgagtgatgaagaggaggaagaagaaaagggagta gaagaggatggaaatgaggaggaagaagatcttcgattggatgttaacttgtctctggct gagtttgagaagaaaatgcttaatgggttttggttacatgatgataaggatgtagatttg aggttggctcgattggagcatcttatggatagaagacctatactggccaatagtgttctt ttacgacaaaatccccataatgtagagcagtggcaccgaagagtgaagctctttgagggc aatcccacgaaacagatacttacttacacagaggcggtgaggacagttgatccaatgaaa gcggtggggaagccccatacgttgtgggttgcgtttgctaagttgtacgagaatcacaaa gatattgcaaatgcaagagtgatttttgataaagcagttcaggtgaactacaagacagtg gataatttggctagtctttggtgtgaatgggcagaaatggaattgaggcataagaatttc aaaggagcactggaactaatgaggcgggccaccgcagagccatccgttgaggtgaaacgc agagtggcggctgatgggaaccaaccggttcagatgaagctgcataagtctttaagaatt tggactttttacgtggatttagaggagagcctgggtaaattggagtccacccgggctgtt tatgagaggatactggatttgaagatagccacgccacaaatcataatcaattatgcattg cttctggaggagcataaatactttgaagatgcgttcaaggtgtatgaaaaaggtaccaaa atatttaagtacccacatgtcaaagacatatgggttacatatctctctaaatttgtaaag agatatgggaagaaagaactggaacgtgcaagacagctatttgaggatgctgttcaagcg gcgcctgctgatgcaaagaaacctctgtatcttcaatttgcaaagctggaggaggattat ggtctagcaaagcgcgctatgaaggtctatgatgaagcaactaaggctgttccaaaccat gagaaattgagcatgtatgaaatctacattgcccgtgctgcggagatatttggcatcccc aaaacaagggagatatatgagcaagcaatagaatccggtcttccagacaaagatgtgaag acaatgtgcttgaagtatgctgagcttgagaagagcttgggagaaattgatcgtgctcgg ggagtatatatatttgcatcacagttttcggatccacgatctgatgtagatttctggaac aaatggcatgaatttgaggtgcaacatggaaatgaagataccttccgagagatgcttcga attaagcgaagtgtttctgcaagctatagccagacacactttattctacccgagtatatg atgcaaaaggatcagagattgaacatggacgaggcaaaagacaagttgaaacaggctgga gttcctgaagatgaaatggctgctttagagaggcagttggcaccagtggctaacggtact accaccaaagatagtaacagaaaagtgggctttgtgagtgctggagtagaatcacagacg gacggagggatcaaagttgctgcaaatcatgaagacattgagctacccgatgcaagtgat tcagaagatgatgaaggggttgaaattgcacaaaaggaggtcccatctgctgtttttgga gagttggctaacaagagaaaggaggctgaaaaagatgagggtggagatggtgctgctgcg accaaggacgatgacagccaccttggtgcccttgagagaataaaaagactaaaacgaggc ggttga

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