KEGG   Prunus avium (sweet cherry): 110758006
Entry
110758006         CDS       T05161                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
pavi  Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pavi03041]
    110758006
   03400 DNA repair and recombination proteins [BR:pavi03400]
    110758006
Spliceosome [BR:pavi03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    110758006
DNA repair and recombination proteins [BR:pavi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     110758006
SSDB
Motif
Pfam: AAA_33 SPRY KTI12 AAA_18 NB-ARC AAA_17 nSTAND3 AAA_7 Chorismate_bind SRP54 Zeta_toxin AAA_22
Other DBs
NCBI-GeneID: 110758006
NCBI-ProteinID: XP_021815472
UniProt: A0A6P5SML5
LinkDB
Position
Unknown
AA seq 650 aa
MASTKRVAPSEDEPQEASKKTKVDDDVPSFSSCSESSRKQRVALNRADCALDFIIEGDEL
KGYALHEQGFAYCWSGARANVGIAGGKYCFGCKVVSLQSVDMEDTAPDRQNLCRLGISRG
DEAVGNLGETAYSFGYGGTGTFSHGGKFSDYGEKFGLGDTIVCSVNLEDKSMASIGFSKN
GKWLGRATYFDVSALGLSVADSPERKMPWQSAVFPHVLLKNVVVELQFSVEDGLVAEEGF
KPWASALEDGNAVIGPFLSEPRDCEVVMMVGLPGSGKTTWAENWVKEHPEKRYVLLGTNL
VLDQMKVPGLLRRNNYGERFDCLMNRATEIFNIILSRAATTPRNYIIDQTNVYKSARKRK
LKPFALFRKIAVVVFPSPEELNVRSKKRAKEMGKEVPADAVNNMLANFILPVSKDMPGSD
EFFDQVMFVELNREESQRYLDEMKQSLACKSDWNRNNSSTYSVGPGFLISPNYGESPMQP
SSLYSVGSYVPNLSPNYGKSPVQPYTIPPLLPPRPVPGAVTPYGSYSGYIGSCGGVTDPY
QSYGPGEPYSRQNIERNSTTFDAATNPYGSSMIVPSLVGSAMTSFTGNNPGYPRAAAPQD
PRAPTFLPSPSPPAYGGLPFGTPAPRPPYGNSSVNTAYPRGYPQPGPRYY
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggcgtcaacgaaacgcgtagctcccagtgaagacgaacctcaggaggcctcgaagaag
accaaggtcgacgacgacgtgccgtctttctcgtcttgttcagaatcgagccggaagcaa
cgcgtggctctcaatcgtgccgattgtgccctagattttataatcgaaggcgatgagctt
aaaggatatgcacttcacgagcagggctttgcttactgctggtctggcgctcgagcgaat
gtgggtatagctggagggaagtactgttttggttgcaaggtcgtatctttgcagtctgtt
gatatggaagacactgctcctgatcgacagaatctatgccgccttggaatttcccgaggg
gacgaagcagttggaaaccttggggaaacagcgtacagctttgggtatgggggtacagga
acattctcacatggtggcaagttttcagattatggtgagaagtttgggctcggcgatacc
attgtttgttctgtcaatcttgaagataaatctatggcttccattggtttctccaagaat
ggaaaatggttgggtagagcaacgtactttgatgtttctgctttgggtctttcagtggcg
gattctccagagaggaagatgccatggcaatcagcggttttcccacatgttttgttgaaa
aatgtggtggtggagttgcagttcagtgttgaagatggccttgttgctgaagagggtttc
aagccttgggcgtctgcactggaggatggaaatgcagttattggaccctttttatctgaa
ccgagggactgtgaagtggttatgatggtaggtttgcctgggtctggcaaaacaacttgg
gcagaaaattgggtgaaagagcaccctgagaagcgttatgttttgcttgggacaaattta
gttctcgatcaaatgaaggtgccagggcttttgcgtaggaacaattatggggaacggttt
gattgtctgatgaatcgagcaactgaaatttttaacatcattttatccagagcagccacc
acacctcgtaattacattattgatcagacaaatgtgtacaagagtgctcgtaaacgtaaa
cttaaaccatttgctctcttccgaaagattgctgttgtggtgtttccaagccccgaagag
ctaaatgttcgttctaagaaaagagcgaaagaaatgggaaaggaggtacctgctgatgca
gtaaataatatgttagccaattttattttacctgtcagcaaggatatgcctggttcagat
gagttttttgatcaggttatgtttgtagaactcaacagagaagagtcacagagatatttg
gatgagatgaagcagtcacttgcatgtaaatctgattggaaccggaataactcttcaaca
tattctgttggccctggttttttaatttcaccaaattatggggaaagtcctatgcagccc
tcttctctgtattctgttggaagctatgttcctaacttgtcaccaaattatgggaaaagt
ccagtgcagccatatactatacctcctctgctgccgcctcggcctgtacctggggctgtt
actccttatggatcttattctggctacattggcagttgcggtggtgttacagatccttac
cagagttatgggccaggtgaaccctacagcaggcaaaatattgaacgcaatagtaccact
tttgatgctgccactaacccctacggtagtagtatgattgtaccctcgctggtaggaagt
gcaatgacttcattcacaggcaataatcctggatatccgagagctgcagctcctcaggat
ccaagagcacccacatttcttcccagtccttccccacctgcatatggaggcttacctttt
ggaactccagctcctagacctccatatggaaattcttctgttaacactgcatatcctaga
ggctatccccaacctggtccgaggtactactga

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