Prunus avium (sweet cherry): 110758006
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Entry
110758006 CDS
T05161
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110758006
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110758006
Spliceosome [BR:
pavi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
110758006
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110758006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_33
SPRY
KTI12
AAA_18
NB-ARC
AAA_17
nSTAND3
AAA_7
Chorismate_bind
SRP54
Zeta_toxin
AAA_22
Motif
Other DBs
NCBI-GeneID:
110758006
NCBI-ProteinID:
XP_021815472
UniProt:
A0A6P5SML5
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MASTKRVAPSEDEPQEASKKTKVDDDVPSFSSCSESSRKQRVALNRADCALDFIIEGDEL
KGYALHEQGFAYCWSGARANVGIAGGKYCFGCKVVSLQSVDMEDTAPDRQNLCRLGISRG
DEAVGNLGETAYSFGYGGTGTFSHGGKFSDYGEKFGLGDTIVCSVNLEDKSMASIGFSKN
GKWLGRATYFDVSALGLSVADSPERKMPWQSAVFPHVLLKNVVVELQFSVEDGLVAEEGF
KPWASALEDGNAVIGPFLSEPRDCEVVMMVGLPGSGKTTWAENWVKEHPEKRYVLLGTNL
VLDQMKVPGLLRRNNYGERFDCLMNRATEIFNIILSRAATTPRNYIIDQTNVYKSARKRK
LKPFALFRKIAVVVFPSPEELNVRSKKRAKEMGKEVPADAVNNMLANFILPVSKDMPGSD
EFFDQVMFVELNREESQRYLDEMKQSLACKSDWNRNNSSTYSVGPGFLISPNYGESPMQP
SSLYSVGSYVPNLSPNYGKSPVQPYTIPPLLPPRPVPGAVTPYGSYSGYIGSCGGVTDPY
QSYGPGEPYSRQNIERNSTTFDAATNPYGSSMIVPSLVGSAMTSFTGNNPGYPRAAAPQD
PRAPTFLPSPSPPAYGGLPFGTPAPRPPYGNSSVNTAYPRGYPQPGPRYY
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacgaaacgcgtagctcccagtgaagacgaacctcaggaggcctcgaagaag
accaaggtcgacgacgacgtgccgtctttctcgtcttgttcagaatcgagccggaagcaa
cgcgtggctctcaatcgtgccgattgtgccctagattttataatcgaaggcgatgagctt
aaaggatatgcacttcacgagcagggctttgcttactgctggtctggcgctcgagcgaat
gtgggtatagctggagggaagtactgttttggttgcaaggtcgtatctttgcagtctgtt
gatatggaagacactgctcctgatcgacagaatctatgccgccttggaatttcccgaggg
gacgaagcagttggaaaccttggggaaacagcgtacagctttgggtatgggggtacagga
acattctcacatggtggcaagttttcagattatggtgagaagtttgggctcggcgatacc
attgtttgttctgtcaatcttgaagataaatctatggcttccattggtttctccaagaat
ggaaaatggttgggtagagcaacgtactttgatgtttctgctttgggtctttcagtggcg
gattctccagagaggaagatgccatggcaatcagcggttttcccacatgttttgttgaaa
aatgtggtggtggagttgcagttcagtgttgaagatggccttgttgctgaagagggtttc
aagccttgggcgtctgcactggaggatggaaatgcagttattggaccctttttatctgaa
ccgagggactgtgaagtggttatgatggtaggtttgcctgggtctggcaaaacaacttgg
gcagaaaattgggtgaaagagcaccctgagaagcgttatgttttgcttgggacaaattta
gttctcgatcaaatgaaggtgccagggcttttgcgtaggaacaattatggggaacggttt
gattgtctgatgaatcgagcaactgaaatttttaacatcattttatccagagcagccacc
acacctcgtaattacattattgatcagacaaatgtgtacaagagtgctcgtaaacgtaaa
cttaaaccatttgctctcttccgaaagattgctgttgtggtgtttccaagccccgaagag
ctaaatgttcgttctaagaaaagagcgaaagaaatgggaaaggaggtacctgctgatgca
gtaaataatatgttagccaattttattttacctgtcagcaaggatatgcctggttcagat
gagttttttgatcaggttatgtttgtagaactcaacagagaagagtcacagagatatttg
gatgagatgaagcagtcacttgcatgtaaatctgattggaaccggaataactcttcaaca
tattctgttggccctggttttttaatttcaccaaattatggggaaagtcctatgcagccc
tcttctctgtattctgttggaagctatgttcctaacttgtcaccaaattatgggaaaagt
ccagtgcagccatatactatacctcctctgctgccgcctcggcctgtacctggggctgtt
actccttatggatcttattctggctacattggcagttgcggtggtgttacagatccttac
cagagttatgggccaggtgaaccctacagcaggcaaaatattgaacgcaatagtaccact
tttgatgctgccactaacccctacggtagtagtatgattgtaccctcgctggtaggaagt
gcaatgacttcattcacaggcaataatcctggatatccgagagctgcagctcctcaggat
ccaagagcacccacatttcttcccagtccttccccacctgcatatggaggcttacctttt
ggaactccagctcctagacctccatatggaaattcttctgttaacactgcatatcctaga
ggctatccccaacctggtccgaggtactactga
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