Prunus avium (sweet cherry): 110758365
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Entry
110758365 CDS
T05161
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110758365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110758365
Spliceosome [BR:
pavi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110758365
Complex C
U4/U6.U5 tri-SnRNP related factors
110758365
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
110758365
NCBI-ProteinID:
XP_021815895
UniProt:
A0A6P5SG30
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All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MEVQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGFLYLRYAADPKTLWNWVEPYIK
DEEEFSPGSNGRTTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQIVAHLEKMKLPTKLSG
ITGEATRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPYEKASSD
DLRTHRSQSREYSDREYSDRDRDRDRGRDRDRNRERERERERDSDRDRERYKERERDRDR
DRARERVRDKEREREKDRERSSDYDRRSKYTERDSRRDQYESSRDGGRHYRRSRSRSRSR
SRSRSRSLQAGAALHLSPQRDVNKDRTSASSNLAKLRDLYGDVSEQKGDASMDRIPRIDN
GGEEVIRLGGSRWK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaggtacagacatgtgggaagcccattgactcgttgctcgagaaggtgctctgtatg
aacattctatcttccgactacttcaaagagctttaccggttaaagacctaccatgaagtt
attgatgaaatttacaaccaagtagaccacgttgagccatggatgaccgggaattgccgg
ggcccgtccaccgctttctgtctgctttacaagtttttcaccatgaagctcaccgttaag
caaatgcacggtctcttaaagcacgaagactctccttacataagagcggttgggttcctc
tacttgagatatgctgcagacccgaagactctttggaattgggttgaaccctacattaaa
gatgaggaggaattctctcctggttccaatggacgaacgacaactatgggtgtatatgtg
cgcgatttgcttcttggacagtattattttgatacccttttcccccgtatccctgttcct
gtgttgcggcagattgtagctcatctggagaagatgaaactccccactaaactttctggc
attacaggggaggctacccgtcatggatctgatgacacagcccgacgccccccttctgtg
aaagctgcactttcggtttcctttggtcaacgtgccccacatcgtgcttcaacaagggac
tcatcacctgttcgtcgtacgttaccgccaccaccaccttatgaaaaagccagcagtgat
gatctacggacccatcgcagccagagccgtgagtattctgacagagaatattcggacagg
gacagggacagggacagaggaagggaccgggatcggaatcgagaaagagaaagagaaaga
gaaagggatagtgatcgggatcgagaaagatacaaggaacgggagcgggatcgagacaga
gacagagcaagggagagagttagggataaggaaagggagcgagagaaagatagagaacga
agttctgattatgatcggaggtccaaatatacagagagagatagccgaagagaccaatat
gagagtagccgtgatggcggtagacattaccgtaggagtaggagtcggagccgcagtagg
agcaggagtagaagtaggagcttgcaagctggcgctgcacttcatttgagtccacaaaga
gatgtaaacaaggatagaacatctgcatctagcaatctggcaaaacttagggatctttat
ggtgatgtaagtgaacaaaaaggggatgctagtatggataggattcccaggattgacaat
ggtggtgaagaggtgattagacttggtggttctcgatggaaatag
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