Prunus avium (sweet cherry): 110758451
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Entry
110758451 CDS
T05161
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110758451
03036 Chromosome and associated proteins [BR:
pavi03036
]
110758451
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110758451
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110758451
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
110758451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
110758451
NCBI-ProteinID:
XP_021816012
UniProt:
A0A6P5SP52
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MSIFLEILKCLFCIEDERENHDYNQIPRQTYDSKISDRNRSPPLTSTNQSPAFYNYKAPS
PPSLPVKSPFSSSSSSPKPPTSSSKPLQSSYISTSSPSPKFPTSSSSSSTFPKPPTSSSK
LPQSAFVNPSSSNASPFILEFPTSVSKLQQSSSVDQRSALPKPPTSSSKLPQSTLVSPSS
PSLQLQTPSSRPSPPKLSTSSSKPPQASSKSHSSSPNPPTSSKPSPSSGLPVSSATLPPI
FKQVLSPASSDVINEKGKKSYVSVEKGSLPIFTIPEDFKDLIKNDIVPKVLKQPLSPTTY
KDYFAALLYAEEFYHEKWAHFNMKNVTLKLQKAAVYKNLDKEEKTFVEFMIDSVPENRPF
LLSRDLVYVRPSGTNAEQFQGIIHRIIRSNLVLVEFEDEFYDYHYSTQKYDVSFSFNRVC
LKRAHQAVQTASDTLFKNFLFPDCVSRTSIPTAPALPSGRHKLDATQLSAVRHILSIQGS
PPYLVAGQLCVERNVFRPSRTGAVVCEAVHQLCQTSLKNRILICAPSNRCCDGIMRGLLK
VIPESDMFRANAAFREKDEVPDDILPSCHYEDPYFSCPPTEKLKKFRVIFSTLMSSFRLH
DKGLTSGHFSHIFLVDASSAIEPETAVALTNFAEKSTTVIVTGQPGDNSRWVRADMARQK
GLKISYFERLFKSRLYRSLNPMLITQLDE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatttttcttgaaattttgaaatgcctgttttgtattgaagatgagcgtgagaat
catgattataatcaaattcccagacaaacttatgattctaaaatttctgatagaaaccgc
tcgccacccttgacttctactaatcaatctccagccttctataactataaagccccatca
cctccatctctaccagtcaaatctccctttagttcatcttcatcatcccctaagcctccg
acatcttcatcgaaaccgctgcaatcttcttatatcagtacatcttctccatctcctaaa
ttcccaacatcttcttcttcttcttcaacattccctaagcccccaacatcttcatctaag
ctgcctcaatcagcttttgttaatccatcttcttccaatgcatctccatttattcttgaa
ttcccaacatctgtatctaaattacaacaatcttcttctgttgatcagcgttcagcattg
cctaaacccccaacgtcttcatctaagctgccccaatccactcttgttagtccatcttca
ccatcccttcaactccaaacaccttcatctagaccatctcctcctaaactctctacatcc
tcctctaaaccacctcaggcttcatcaaaatcacattcatcatcaccaaatcctccaaca
tcttcaaaaccatctccatcctcaggactgcctgtgtcttccgctacgctccctccaatc
tttaagcaagttctatccccagcctcctcagatgtaataaatgaaaaggggaagaaaagt
tatgtatcggttgaaaagggttcattacctatattcacgattcctgaggatttcaaagat
ttgatcaagaatgacattgtgccaaaagttcttaaacagcctctgtctcccacgacatat
aaggattactttgctgctctgttatacgctgaagagttctaccatgagaaatgggctcat
ttcaatatgaagaatgtgacactgaagttgcaaaaagcagcagtttacaaaaatctagac
aaggaagagaaaaccttcgtagaatttatgattgattctgttcctgaaaatcggccattc
cttttgtcaagggacttagtctatgtacggccatcaggtacaaatgctgagcagtttcag
ggaattatacatcgcattattaggagcaatcttgtattagtggaatttgaagatgaattt
tatgattatcattattcgacccaaaaatatgatgtcagcttctcattcaatagagtatgt
ttgaaaagagctcaccaagcagttcaaacagcatcggatactttgtttaagaacttcctc
tttcccgattgtgtatcccgtacgagcattcccactgcaccagcgctgccgtctggccgt
cacaaacttgacgccacccaattatctgctgttcgtcatattttaagcattcaaggctca
ccaccttacttggtggctggccagctttgtgttgaaaggaacgtttttaggccgtcgaga
actggagcggttgtttgtgaagcagtgcaccagttatgtcaaacctcactcaaaaatagg
attctgatatgtgctcctagtaaccgctgttgtgatgggattatgagaggcttgttgaaa
gtgattccagagtcagatatgtttcgagccaacgctgcattccgtgagaaagatgaggtg
cctgatgacatcctcccatcatgccattacgaagacccttatttctcttgtcctccaact
gagaagctcaaaaaattcagggtgattttctcgactctcatgagtagctttcggctacat
gataaaggtctaacttctggacattttagtcatatttttctggtggatgcttcatctgcc
attgagccggaaacagcagtggccttaactaattttgcagaaaaaagtactactgttata
gtcactggtcaaccaggagataattcacgttgggttcgagcagacatggcaaggcaaaag
ggactgaagatttcatacttcgagagacttttcaagtcaaggctatacagaagcctcaat
ccaatgcttatcacacaattggacgagtag
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