Prunus avium (sweet cherry): 110758599
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Entry
110758599 CDS
T05161
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110758599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavi03009
]
110758599
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110758599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Utp13
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR41
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
Beta-prop_NWD2_C
WD_LRWD1
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_NOL10_N
Cytochrom_D1
Beta-prop_ACSF4
WD40_like
VPS11_N
Nbas_N
SieB
Motif
Other DBs
NCBI-GeneID:
110758599
NCBI-ProteinID:
XP_021816190
UniProt:
A0A6P5SGW0
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MASLPLKKNYRCVPSLQQFYSGGPFVVSSDGSFIACKCGDSIKIVDTSNASIRSTIEGDS
EDVTALALSPDDKLLFSSGHSRQIRIWDLATFKCVRSWKGHDGPVMGMACHPSGGLLATA
GADRKVLVWDVDGSFCTHYFKGHKGVVSSVLFHPNPTKSLLFSASDDATVHVWDLLAKKC
VATLNGHHSTVTSMALSADGRTLLTAGRDKVVILWDLRDYSCMKTVTTYEVLEAVCAIHS
GPLLSSCLSSYKQKSGKKSGLPAICFITVGERGVVRIWNSEGAVCLFEQKSSDVTPSSDG
DESKRGFTAAVMLPSDKGLLCVTADQEFLLYSPVKVPEGTLEFALSKRLVGYNDEIVDMK
FLGDEEQFLAVATNIEQVRVYDVASMSCSYVLAGHTGIVLCLDTCVSSCGRTLIVTGSKD
NTVRLWESESRCCLGLGIGHMGSIGAIAFSKKRKDFFVSGSSDRTLKVWTLDGLPNNGKK
PINLKAKAGVAAHDKDINSVAVAPNDSLVCSGSQDRTACVWRLPDLVPVVVLKGHKRGVW
SVEFSPVDQCVITASGDKTIKIWTISDGSCLKTFEGHTTSVLRASFLTRGTQFVSCGADG
LLKLWMVKTDECIATYDQHENKVYALAVGKNTEMLATGSSDAVINLWYDCTASDKEEAFR
REEEGVLKNQELENAVLDADFTKAIQVAFELRRPHKLYECFSQVWRKRKNEKQIEKSLQT
LGKEELKLLFEYVREWNTKPKLCHVAHFVLSKVFSILNPIEITEIKGIDEVLEGLLSYSQ
RHFSRMDRHVTSTFLVNYTLTGMSVIEPETDTRVMDDKSLMHSVGDDENGTLIQEPEDEE
QKQTSQGLKEKAVSKKRKSKKSKDGVNKKVKGSSL
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctacctctgaagaagaactaccgttgcgtgccctctctgcaacagttctac
tccggcgggcccttcgtggtctcatccgacggctccttcatcgcctgcaagtgcggcgac
tccattaagatcgtggacacctccaatgcctcaattcggtcgaccattgaaggcgactct
gaggacgtcacagctttggcccttagccccgacgacaagttgctcttctcctctggccac
agtcgccaaattaggatttgggacctcgccaccttcaagtgtgtgcgttcttggaagggt
catgatgggcctgtgatgggaatggcttgtcacccatctgggggattgcttgcgactgca
ggagctgataggaaggttcttgtttgggatgttgatggtagcttctgcactcattacttt
aaaggtcacaaaggagttgtttctagtgttctcttccatcccaatcctactaaatcactt
cttttctccgcaagtgatgatgcaactgtgcatgtttgggacctattagccaagaagtgt
gttgcaacacttaatgggcatcactcgacagtcacttctatggcactatctgcagatggg
aggacgttgctcacagctggaagagataaggttgtaatcttgtgggaccttcgtgactat
agctgcatgaagactgtaacaacatatgaggtccttgaagctgtgtgcgcaatccattct
ggacctctgttatcttcctgtttgagttcctacaagcagaagagtgggaagaaaagtggg
ttacctgcaatatgttttataacagttggtgaacgcggggttgtacggatttggaattct
gaaggtgcagtttgcctttttgagcaaaagtcctcagatgttactccctcctcggatggg
gatgaatcgaaaaggggtttcactgccgctgtcatgctaccatcagataaagggctgctt
tgtgtgactgccgatcaggagttccttttatattccccagttaaggttcctgaagggacg
ttggaatttgccctaagcaaaagacttgtaggatacaatgatgagattgtggatatgaag
tttttaggtgatgaggaacaatttcttgctgttgccacaaatattgaacaggtacgagta
tatgatgtcgcatccatgtcgtgttcttatgtgctggcaggtcataccggaattgttcta
tgtcttgacacctgcgtatcaagttgtggaagaacgcttatagtgaccggaagcaaggac
aacactgttcggttgtgggaatcagaaagtagatgttgccttggtcttggcataggtcac
atgggaagtattggagctattgctttctcaaaaaagcgtaaagactttttcgttagtggt
agtagcgatcgtaccctcaaggtgtggactttggatggtcttccaaacaatgggaaaaag
cctataaatttgaaagcaaaggctggtgtagcagcccatgataaggatatcaattcagta
gctgttgcacctaatgatagtttagtttgtagtggttcacaggatcgcactgcttgtgtc
tggaggcttccagatcttgtaccagtagttgtacttaagggtcataaaaggggcgtttgg
tctgtagaattttctccagttgatcaatgtgttataacagcttctggtgacaaaacaata
aagatatggaccatatctgacggttcatgcttgaaaacatttgaagggcatacaacaagt
gtattaagagcatcattccttactcgtggaacccagtttgtttcttgcggtgctgatggt
ttgttaaagctgtggatggtcaaaactgatgaatgcattgctacatatgatcagcatgag
aacaaggtttatgccttggctgttggaaagaacacagaaatgcttgcaactggcagcagt
gatgctgtcatcaatttatggtacgattgtactgcctctgataaagaggaagcttttcgt
agagaggaggaaggtgttttaaagaatcaagaactagaaaatgctgtattagatgctgac
tttactaaagcaatccaagtcgccttcgagcttcgcaggcctcataagctttatgagtgt
ttttctcaagtttggaggaagagaaaaaatgaaaagcagatagagaaatcccttcagacc
cttggcaaggaagagctcaagctattatttgaatatgttcgagaatggaatacaaagcca
aagctctgtcatgttgcacactttgtgctttctaaagttttcagcatccttaatccaata
gagattactgagataaaaggcattgacgaagtccttgaaggtctcttgtcatattcccag
aggcattttagcaggatggacaggcatgtaacaagcacatttttggtaaactacactctt
actgggatgtcagtcattgaaccagagacagacacaagagtaatggatgacaagtctttg
atgcactctgttggtgatgatgagaatgggacgttaatacaggaacctgaagatgaggag
caaaagcagacctctcaagggttgaaagaaaaagcagtttcgaagaaacggaaatcaaag
aaatcaaaagatggtgtcaataagaaagttaaggggtccagcttataa
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