Prunus avium (sweet cherry): 110758987
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Entry
110758987 CDS
T05161
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110758987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110758987
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110758987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAPA-1
Motif
Other DBs
NCBI-GeneID:
110758987
NCBI-ProteinID:
XP_021816666
UniProt:
A0A6P5SSR2
LinkDB
All DBs
Position
Unknown
AA seq
1776 aa
AA seq
DB search
MSDDAKMIKVEEEIEGERVESNDYIFERIGEPVPIQHDESCFDPQGSPSRPLAVSEKHGL
VFVAHSSGFCVARTKDVMASAAEIKERGSSSSIQELSVVDVPLPKLNILELSTDSSTLAA
TADANIHFFSVDSLLDKGLKPSFSCSLNESSSIKDMQWTRKPENFYVVLSNLGKLYHGTV
GGPMKDVMDNVDAVGWSLKGKLIAVARRDILSILSSNFKERSSMLISFKSWTDDSNANCS
IKVDSIRWVRHDSIILGCFQLTADGNEESYLVQVIKIKDGKFADGSCKPVLIPFYDLFSG
LIDDILPSASGPYLLLSYLEQCELAITANRKNVDQHIVYLSWSLGNEKNEVVVVDIFRDS
LLPRIELQENDDDNLILGLCVDKISKSEKISVRLGEEQRELSPYCILMCLTLEGKLIMFH
VASVSGITVSPAIVSALSDEEEEEEDSTALVLVESKSSKRSSWLGKEQLEKVSMDASLGI
EKRKELDRNVGLDFRIKDDIKSLDVNETLTSEFVTNQTINKESTNSNKKAEPLTNSQSFE
ADGQQEVIVPKRSPDKNGNQLQFPGLENRNMGPASTNASLQGVPDHAFRDLIKTETQKIA
GFGTAVKSTLKDTHKSFETAAGSPGKMESMGLEGVSSQSWSSGKIISSKDTGVKSLLMPS
NIIEGSRSGNANQIVAPTDAYGKPSGKPLHFKDISASSTSVNFSDRLTENGGQRPSAAAG
NIVSLPSISSSLMSSQESFSVGKSPTYNIYPSKESYSDLPPSRRLNSEPNLSKQFGNIKE
MTKELDMLLQSIEEPGGFKDACTVNQKRSVEELERGIGTLSDRCRKWKSIMDERLKEIEH
LLDITVQVLARKIYMEGIVKQASDSRYWDFWNCQKLSSELELKRRHILKMNQDLTDQLIQ
LERHFNGLELNKFGENAGAHAGRRALQSRFGPSRHIQSLHSLYSTMTSQLAAADHLSECL
SKQMAALKIESPSVKKQNVKKELFETIGIPYDASFSSPSPGATKVGGTPNEKLSFSLGST
ASKDQPRRNVNAIKNYEPETARRRRDSLDRSWEDYEPTKATVKRLLLQESGKESTSRSSF
PVDKQHFSPHLLDGSAITRPRDHISPATFLHPSENKAGIQGTHMKQPFQSSATPFGWANE
LPGPLQPTGLTFPIMQEHKMSSASQLLPAGRQSFAREPNMTAEKFGNGIPYIEKSESDSV
KEKSVVQSDTSQKPSVSLVPTQTPSLLKKPNDMLNSFAKGTLPKQESVKDRPLTATVPSI
EAGKKLNFSLSSSLAVPVAISQPGKVDQRDAATSKSQPGKILPSPTFSMSVSTPLSPVFS
SSSAPLSPLSISPSVVMPSNRSLDSSNTNADVSKPVSTSSLSSFLPPIVSPPSFFSFDAS
KPLVSSSAPSPVTNSTSESTKTEIQHSLKTDTNANTILPPQECGPSTVETNLKIKPSVSS
PLTIETSTGLASGSQASSNNTAGPTNNVRMNAEQEKPSAGHSPFPTLPTSGSVTGGRTDG
LDVQNAQEDDMDEEAPDTSSTTELSLGSLGGFGLGSAPNPTAPKPNPFGGSFGNAGTNVT
SSFSMTVPSGELFRPASFNIQSLQPSQSSQPANSGGFAGGFGTGTTAQAPSPSKFGQPVQ
VGPGQQALGSVLGTFGQSRQLGTSLPGTSFGSPGGFGGGIAGTNPTGGFSSAATGGFAGA
ATAGGGFASLASGGGGFASAGSGGGGFAGAGSGGGGFVGAASAGSGFTGAASSGLLPVAG
GGFAAFGGQQGSGGFSGFGSAGGTGKPPELFTQMRK
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgcgaaaatgattaaagtagaagaagaaattgaaggagagcgtgtggag
tcgaacgactacattttcgaaaggatcggcgaacccgtcccaattcagcatgatgaatcc
tgtttcgatccccaaggcagtccctcccggcccctcgccgtctccgagaaacacggcctc
gtgtttgttgctcattcctctgggttttgcgttgcgaggaccaaagatgttatggcttca
gctgctgagattaaggaaaggggaagctcttcttctatacaggagctaagtgttgtggat
gttccccttcccaaactcaacattctcgaactctctaccgatagttctactcttgccgct
actgctgatgcgaacattcacttcttctctgttgattcccttctcgataagggtctaaaa
ccatctttctcttgttcgctcaatgaatccagctctatcaaggatatgcagtggacaagg
aaacctgaaaacttttatgtggttctttcaaatcttgggaagctatatcatggaacagtt
ggtggccctatgaaagatgtgatggacaatgttgatgctgttggatggagtttaaaagga
aaactaattgctgtggcaagaagggatattcttagcattctatcatctaacttcaaggag
aggtcgtcaatgttaatttcgttcaagtcttggactgatgattccaatgcgaactgcagt
ataaaagtggactctatcaggtgggttcgtcatgatagcatcattctaggatgctttcaa
cttactgcagatggaaatgaagaaagttaccttgtccaagtgataaaaataaaagatggc
aagtttgctgatggttcttgcaagccagttctgatacctttctatgatttgttttcggga
ctcattgacgacattctgccttctgctagtggcccatatttgttattgagctatttggag
caatgtgaacttgcaattactgctaacaggaagaacgtggatcaacatattgtgtatctt
agctggtcgcttggaaatgagaagaatgaagttgtagttgttgatattttccgagatagt
ttgctaccaaggattgagcttcaagaaaatgatgatgataatttgatactggggctctgc
gtagataaaatttcaaaaagtgagaaaattagtgtccgacttggagaggaacagagagaa
ctctcgccatattgcattcttatgtgtctcacgcttgagggaaaactaataatgttccat
gttgccagtgtcagtggaattacagtttcacctgctattgtttctgctctttctgacgag
gaagaggaggaagaggattccactgctttggtactggtagaaagtaagtcatctaaacgt
tcttcctggctggggaaggaacaacttgaaaaggtttctatggatgcttcattgggtatt
gagaaaagaaaagaacttgacagaaatgtaggccttgattttcgtataaaagatgacata
aagtctcttgatgtaaatgagactttgacgtctgagtttgttactaatcaaacaattaat
aaagaaagtaccaacagtaacaagaaagcggagccactgacaaattctcaatcgtttgaa
gctgatgggcagcaagaagtcattgtcccaaaacgctccccggacaaaaatgggaaccaa
ttacagtttccgggactggaaaacagaaatatggggccagcatctactaatgcttctctc
caaggggtgcctgatcatgcgttcagggacttaatcaagacagaaactcaaaaaattgct
ggatttggaactgctgtaaaatccactttaaaggatactcataaaagttttgagacagcg
gcaggatctccaggaaaaatggagtcaatgggtttagagggtgtttcatctcagtcctgg
tcaagtggaaagatcatatcatcaaaggacactggtgtgaaatctctacttatgccttca
aatattattgaaggcagcagatctggaaatgctaatcaaattgttgctcctacagatgct
tatgggaaaccttctggaaaaccgcttcatttcaaggatatttctgcttcatcaacttca
gtcaacttttctgataggctgacggagaatgggggacaaaggccatcagctgcggctgga
aatatagtatcactgccttccatttctagctccctaatgtcatcacaggaaagtttttcc
gtcggaaagtctcccacctacaacatttatccatccaaggaaagttatagtgatctaccc
ccgtcgaggaggctgaactctgaaccaaatttatcaaaacaatttggaaatatcaaagag
atgaccaaggagttggatatgcttctacaatctatagaagaaccaggtggtttcaaggat
gcctgcactgttaatcagaaaaggtccgttgaagaattggagagaggcatagggactcta
tctgacagatgcagaaagtggaagagcattatggatgaacgacttaaagaaattgaacat
cttcttgacataactgtacaagtattggcaaggaaaatatacatggagggaattgtgaag
caagcttctgatagccgatattgggacttctggaattgtcagaagttgagttcagaactt
gagctgaagcggcgacatattttaaaaatgaaccaggatttgactgaccaattaattcaa
ttggaaaggcattttaatggccttgaacttaataaatttggtgaaaatgctggagctcat
gctggtcgaagagctttgcagagtcgatttgggccttcaagacacattcaatccttgcat
agtttatatagcacaatgacgtctcaattagctgctgctgaccatctttctgagtgcctc
tcgaaacaaatggcagcactgaagatagagtcaccttccgtaaaaaaacagaacgtaaaa
aaagagttgtttgaaacaatagggattccatatgatgcctctttcagctccccttcccca
ggtgctacaaaagttggtggtacgccgaatgagaaactatcattttctttgggttctact
gcttctaaagatcagcccaggagaaatgtgaatgccataaagaattacgaaccagaaact
gcaaggaggaggagagactcactggacaggagctgggaagattatgagcctacaaaagca
actgtgaaaaggttgcttttgcaagaaagtggcaaggaaagcacgagtagatcatccttt
cccgttgataagcaacactttagccctcacctgctggatggatcagctattactcgccca
agggatcacataagccctgcaaccttcttgcatccatctgaaaacaaagcaggcattcag
ggtacgcatatgaagcagccttttcagagctcagcaactccatttggttgggctaatgaa
cttccaggaccattacaacctactgggctgacgtttcctataatgcaagaacacaaaatg
tcatcagcatcccaattgttgcctgcaggtcggcaaagttttgcaagggaacctaatatg
acagcagaaaaatttggcaatggcattccatatattgagaagtccgagtcagattcagtg
aaagaaaagtctgtcgtgcaatcagacactagtcagaaaccatccgtttctttggttcct
acacagacaccgtcattgctgaagaaaccaaatgatatgctaaattcatttgccaaaggt
acgcttccaaaacaagagagtgtgaaggacaggccgttgaccgcaacagttccatctatt
gaagctgggaaaaaactgaatttttcattgtcttcctcacttgctgttcctgtggccatt
agccagcctggaaaggttgaccagcgtgatgctgcaacaagcaaaagccagcctggtaaa
attttaccttctcccactttctcaatgtcagtttcgacacccttatctccagtatttagt
tcatcatcagcacctctatctccgttatcaatttcaccatcagtcgtgatgccttcaaac
agatctttggatagttctaacactaatgcagatgtgagtaagcctgtatcaacatcgtca
ttgtcatcttttctccctccaattgtttctcctcctagttttttctcttttgatgcttcc
aaaccactggtgtcctcatctgccccatcacctgtgacaaattcaacatcagagtctact
aaaacagagatccaacattctttaaaaacagacacgaatgctaatactatattgccacct
caggaatgtgggccttccacagttgaaactaatttgaagattaaaccttcagtatcatct
cccctcacaattgaaacttcaacaggactggcatctgggagccaggccagttcgaacaat
actgcaggtccaacgaataatgtgagaatgaatgccgagcaagaaaagccatctgccgga
cattctccattcccaacactcccaacttcagggagtgttactggtggaaggactgatggg
ttggatgtacaaaatgcacaggaggatgacatggatgaggaggctccagacacaagcagc
acaactgaacttagtttgggaagccttggtgggtttgggcttggctctgcccctaaccca
acagctcctaaacctaatccatttggtggatcatttggcaatgcaggaacaaatgtgact
tcttctttctccatgactgtccctagtggtgagctgtttcggcctgcatcttttaacatc
caatctctacagccttctcaatcatctcagccagcaaattccggtgggtttgctggtggc
tttggcactggtactactgcccaagctcccagtccgagtaagtttggccaaccagtacag
gttggaccagggcagcaagcattagggtcagttcttggtacttttggacagtcgagacag
cttggtactagtctaccaggaaccagttttggatcacccggtggttttggtggtggcatt
gctggaactaatcccactggtggcttctcaagtgctgctactggagggtttgctggtgct
gctactgcgggtggcgggtttgccagtttggcttcaggtggtggtgggtttgccagtgca
ggttcaggcggtggtgggtttgccggtgcaggttcaggtggagggggtttcgttggtgca
gcttcagctggtagtggttttacaggagctgcttctagtggtttacttcctgtggctggt
ggtggatttgcggcattcggtggtcaacaaggatctggtggtttctctggttttggtagt
gcaggaggaactggaaagcctccggagttgttcacacagatgaggaagtaa
DBGET
integrated database retrieval system