Prunus avium (sweet cherry): 110759114
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Entry
110759114 CDS
T05161
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110759114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110759114
03036 Chromosome and associated proteins [BR:
pavi03036
]
110759114
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110759114
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110759114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
110759114
NCBI-ProteinID:
XP_021816835
UniProt:
A0A6P5SRG4
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MGIDSETCNAQIVCQQKRRRISSNTGISLCETFSPLEASLPYLPTLEEADYYTQPSLKEL
AAREYTDPGFSSRVLDFTVGRFGYGSIKYLGKTDIRRLELDKIVKFRRHEVIVYEDETAK
PLVGQGLNKPAEVTLVLQTRPSNMEKRQRDNSVKKLRQIAERQGAQFISFNPENGEWKFF
VHHFSRFGLSEDDEEDIMMEDAAAAQDLVEMNHGEISDADEETQMDPTGIVLSHSLPAHL
GLDPVKMKEMRMLMFPDGEEEAEELNQVPAHYNPSFGREYIRPPLQNTSQRMSDRSTPPP
VRKTPLALLEYKHGSFDSNSPGAILMAQENKVMPPKILKEGFKLDLKHETPVTKRHCRNI
VDAGLLMGRSFRVGWGPNGTLVHAGTPVGSTGSQMMLSSTINLEKVAIDNVVRDENNKVR
EELIDMAIDSPLDFHMGLLHQTEEIEVGSFNLRLQKVVSNRLMLSEICRSYVEIIEKQLE
VPRLSSSSRLVLTHQVMIWELIKVLFSDRENGGKMKSLGADNEEEMVQDVKEASQEVDLE
ALPLIRRAEFSYWLQENVCHRVQEKMSSLNESSYLEYILLLLSGRQLDAAVELAASRGDV
RLACLLSQAGGSIVNRSDMAQQLDRWRINGLDFSFIEKDRIRLYELLAGNINSAFHDVKV
DWKRFLGLLMWYQLAPSTSLPTVFRTYQHLLHEGKAPYPVPIYIDEGLVEESENFSAVKR
CDLSYYLMLLHASEESEVGFLKSMLSAFSSTHDPLDFHMIWHQRAVLEAVGAISSKDLHV
LDMGFVSQLLCLGKCHWAIYVVLHMPHCEDFPYVHANLIREILFQYCESWSSQESQRQAI
ENLGIPKAWLHEAMAVYFNYYGDLAKALEHFLQCANWQKAHTIFVTSVAHKLFLSAEHSE
IWRLATSMEDHKLEIENWDLGAGIYISFYLIRSSLQEADNTMNKLDSLESKNFACREFLG
QLKQSLAVWGVQLPVDVRVVYSKMADEICNLLLSDIGDGPTRDIQLSCFDTVFSAPIPED
LRASHLQDALSLFTCFLSEVAT
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgggcattgattctgaaacttgtaatgcacaaattgtgtgccaacaaaaaagaagaagg
atatcttcgaacactggcatttcgttgtgtgagacatttagtcctcttgaagcttcctta
ccctatttaccaactttagaagaagctgattactacacacagccctctttgaaggaattg
gctgctcgagaatatacagatcctggtttttctagtcgagttttggactttacagttgga
agattcggttatggatccatcaaatatcttgggaagactgacattaggagattggaatta
gataaaattgtgaagttccgcagacatgaggttattgtatatgaagatgaaactgccaaa
cctttggttggccaaggccttaacaagcctgctgaagtcactttagtgctacaaacaaga
ccatcaaatatggaaaagagacagagagataatagtgtgaaaaaattgaggcagattgcg
gagagacaaggagctcagtttatttcgtttaatccagaaaatggggaatggaaatttttt
gttcaccatttcagcagatttggattgagtgaagatgatgaagaagacatcatgatggaa
gatgctgctgcagctcaagatcttgtagaaatgaaccatggtgagatttctgatgctgat
gaagaaacccaaatggatcccactggaattgtgctttcgcattctcttcctgctcatctt
gggcttgaccctgtaaagatgaaagaaatgagaatgttgatgtttcctgatggggaagag
gaagctgaggagttgaatcaagtacctgcacattataatccatcctttggtagagaatac
ataagacctcctttacaaaatacttctcagaggatgagtgatagatctactccaccacct
gttcgaaaaaccccattggcattgctcgagtataagcatggtagttttgactcaaactct
cctggggccattctaatggcccaagaaaataaggtcatgcctccaaagatactaaaagaa
ggttttaagcttgatctcaagcatgaaacaccagtaactaaaagacattgtcgcaacata
gttgatgcaggtctgttgatgggtaggtcatttcgagtaggatggggtcctaatggaacc
ctagtccatgctggaacacctgtagggagtactggttctcaaatgatgttatcatccaca
atcaatttagagaaggttgctattgacaatgttgttagggatgaaaataacaaagttaga
gaggaacttattgacatggctattgattctccactagattttcacatgggattacttcat
cagacagaagagattgaagttggatcctttaacctaaggctgcagaaggttgtctctaat
cgcttgatgctatcagagatttgcaggagctatgtagagatcattgagaagcagctggaa
gttcctaggctatcttcctcttctcgtttggttttgacacaccaagtaatgatttgggaa
ctgataaaagttcttttttctgatagggaaaatggtgggaaaatgaaatctttgggtgct
gataatgaggaagaaatggtgcaggatgtgaaggaagcttctcaagaagtcgacctggaa
gcattacctcttattcggagggcagagtttagttattggttgcaagagaatgtatgccat
cgagtacaagaaaaaatgagctccttgaatgagtccagttatctggaatacatattatta
cttctgagtgggcgccaactggatgcagctgttgaactggctgcttctcggggagatgtg
agattggcttgtttgttaagtcaggctggagggtccatagtcaatcgttccgacatggct
caacagcttgatcgttggaggatcaatgggctggatttcagtttcattgagaaagacagg
ataaggctttatgagttgcttgctggtaatatcaacagtgcttttcacgatgttaaagtt
gattggaagaggtttctagggttattgatgtggtatcaattagcacctagcacctcattg
cccactgtttttcgcacttatcaacatcttcttcacgagggtaaggctccataccctgtt
ccgatttacattgatgaaggactggtagaagagtctgagaattttagtgcggtaaaacgt
tgtgacctatcatattatcttatgctgctacatgccagtgaagaaagtgaagttggcttt
ctaaagagcatgctcagtgccttttcatcaacacatgatccgcttgatttccatatgatc
tggcatcagcgtgcagtgttggaagcagttggggctatcagctctaaggatcttcatgtt
cttgacatgggatttgtttcccagctgttgtgtcttgggaaatgtcattgggccatctat
gtggtccttcacatgccccattgtgaagattttccatatgtccatgctaatcttattcgg
gaaatcttgttccaatattgtgaatcctggagttctcaagaatcacaacgccaagccatt
gagaacttgggtattcctaaggcatggcttcatgaggctatggctgtttatttcaattac
tacggggatcttgcaaaggcccttgaacactttcttcaatgtgcaaattggcagaaagca
catactattttcgtaacttctgttgcccacaaattattcttgtctgccgaacactcagag
atatggaggcttgcaacttccatggaggaccacaaattagaaattgaaaattgggacctg
ggagctgggatttatatttcattctatctaattagaagttcattgcaggaagcggacaat
accatgaacaaactggattctcttgaaagcaaaaattttgcatgtagagagttccttggt
cagttaaagcagtctttggctgtttggggtgtccagctacccgttgacgtgagggtagtg
tattcaaagatggcagatgagatatgcaatttgcttttatctgatattggagatggccca
acacgagatattcaattaagttgttttgacaccgtttttagtgctcccattcctgaagac
cttcgcgcaagtcatttgcaagatgcactgtctctctttacatgctttctttcagaggtt
gctacatag
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