Prunus avium (sweet cherry): 110759126
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Entry
110759126 CDS
T05161
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110759126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110759126
Spliceosome [BR:
pavi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110759126
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
110759126
NCBI-ProteinID:
XP_021816847
UniProt:
A0A6P5SRH4
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All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNEADVVVEDDADAGNMEEDIDGDLADLETLNYDDLDSVSKLQK
TQRYTDIMQKVEEALEKGSDISSHGMVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRPKFPELESLVHHPIDYARVVKKIGNEMDVTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEEVLTKTNEACDRALALDSSKKKVLDFVESRMGFIAPNLSAIVGSAVAAKLMGTAGGL
VSLAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYVEQTEIFQTTPPSLRMRACRLLAAK
STLAARVDSTRGDPSGNTGRAFREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSMGQSKLAA
KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGGGTQSTYFSETGTFS
KIKRI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctcgctgattcatttcttgcagaccttgatgaactatctgacaatgaagct
gatgttgttgttgaagatgatgctgatgctggaaacatggaagaagatattgatggggac
ttggcagacttggaaacgcttaattacgatgacctggatagtgtttcaaaattgcagaaa
acgcaaagatatactgatataatgcagaaagtggaagaggctttggagaagggttctgat
atttcaagtcatggaatggttttagaagatgatccagaataccagctgattgtggactgt
aatgctttgtctgttgacattgagaatgaaattgtaatcatccacaattttattcgtgat
aagtatcgcccaaagtttccagagcttgaatcacttgtgcatcatccgattgattacgcc
cgagttgttaagaaaattgggaatgaaatggatgtaacccttgttgatctggaggggctt
ttaccttcggcaattattatggttgtgtcagttacagcatcaactacaagtggcaagccg
cttccagaggaagtccttacaaaaacaaatgaggcatgcgatcgagcccttgctcttgat
tcatcaaagaagaaggttcttgatttcgttgaaagtagaatgggctttattgcaccaaat
ctttctgctatagttgggagtgctgttgcggcgaaactaatggggacagctggcggtctc
gtatccttagctaagatgcctgcttgtaatgttcagcttcttggtgctaagagaaaaaac
cttgctgggttttccactgcaacatcacaatttcgtgttggttatgttgagcagacagaa
atatttcaaactacacccccttctttgaggatgcgtgcttgccgactcttggctgcaaaa
tcaacacttgcagcacgggtggattcaacgagaggagatccatctggaaacactggaagg
gcattccgggaggagatacgtaagaaaattgagaaatggcaggagcctcctcctgcaaaa
caacctaaaccacttccggttcctgattctgaacctaaaaagaagagaggtggtcgccgg
ttaaggaagatgaaggaaagatatgcaataacggacatgaggaagctggcaaataggatg
caatttggtatacctgaagagagttccttaggtgatggactgggtgaaggttatggaatg
cttggtcaagctgggagtggcaagctgcgtgtatcaatgggtcagagcaaacttgctgcc
aaagtcgctaagaagttcaaggaaaagaattatggaagcagtggtgctacatctggactc
acttcaagtttagcatttacgcctgtgcaggggatcgagctctcaaatccacaggcacat
gcacaccagctcggtggtggaactcaaagcacctacttctctgaaacaggaacattttca
aaaatcaagaggatctga
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