Prunus avium (sweet cherry): 110759213
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Entry
110759213 CDS
T05161
Name
(RefSeq) serine/arginine-rich splicing factor SR30
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110759213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110759213
Spliceosome [BR:
pavi03041
]
Common components
Common spliceosomal components
SR proteins
110759213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
110759213
NCBI-ProteinID:
XP_021816940
UniProt:
A0A6P5SJ00
LinkDB
All DBs
Position
Unknown
AA seq
295 aa
AA seq
DB search
MSSRSSRTIYVGNLPGDIRMREIEDLFMKYGPIVDIDLKVPPRPPGYAFIEFEDARDADD
AIYGRDGYNFDGYRLRVELAHGGRGHSSSMDRYSSYSHSSSSRGASRRSDYRVLVTGLPP
SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIADYTNYDDMRYAIRKLDDSEFKNAFSRA
YIRVKEYDSRRSYSRSPSYDMRRSYSRSPSRSPYMSRSQSRSRSYSYGGRIRSISPEAKY
LHRSPSASYPRSVSRSRARSRTRSRSPVSSARPRSLSRSKSRSRSLSRSLSPSAR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgatcgagtcgcactatctacgtcggcaatctgcctggggatattcgtatg
agagaaattgaagatttgttcatgaagtacgggcccatcgtcgacattgatctcaaagtc
ccgccgagaccaccgggttatgcttttattgagtttgaagatgctcgagatgctgatgat
gcaatttatggccgggatgggtacaactttgatgggtatcgtttacgggttgaactagcg
catggtggacgaggacactcatcatcaatggatcgatacagcagttacagtcatagtagc
agtagccgtggagcttcccgtcgctctgactatcgtgtactggtcactggattgcctcct
tctgcttcatggcaggatctgaaagaccacatgcgtcgagctggtgatgtctgtttctcc
caagtgttccgtgatcggggtggcatgacgggaattgcagactacacaaactatgacgat
atgagatatgctatccggaaacttgatgactctgaattcaaaaatgctttttctcgggct
tacatacgggtgaaggaatatgattctagacgtagctattccagaagccctagttatgac
atgagacggagctactctagaagccccagtcgtagtccatatatgtcgagaagtcaaagc
cgcagtcgcagctatagctatggtggccgaatcagaagcatatcaccggaggcaaaatat
ttgcaccgctctccatctgcatcttatccaaggtctgtctcacgttcccgtgcaagatct
cggacaagatctaggtctccagtttcttctgctcgtcccaggagtctgagcagatccaag
tcaagatccagaagcttatcccggtcgctttcaccttctgcacggtga
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