Prunus avium (sweet cherry): 110759394
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Entry
110759394 CDS
T05161
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03030
DNA replication
pavi03410
Base excision repair
pavi03420
Nucleotide excision repair
pavi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110759394
03410 Base excision repair
110759394
03420 Nucleotide excision repair
110759394
03430 Mismatch repair
110759394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pavi03032
]
110759394
03036 Chromosome and associated proteins [BR:
pavi03036
]
110759394
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110759394
DNA replication proteins [BR:
pavi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110759394
DNA Replication Termination Factors
ELG1-RFC complex
110759394
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
110759394
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110759394
Check point factors
HRAD17(Rad24)-RFC complex
110759394
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
Sigma54_activ_2
AAA_lid_RFC1
Mg_chelatase
DUF815
AAA_22
RuvB_N
ABC_tran
RsgA_GTPase
AAA_29
nSTAND6
AAA_23
AAA_2
AAA_5
AAA_24
T2SSE
AAA_16
SprT-like
NB-ARC
Motif
Other DBs
NCBI-GeneID:
110759394
NCBI-ProteinID:
XP_021817136
UniProt:
A0A6P5SU25
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDQAMVHQDIAQNLKKLVSEQDCPHLLFYGPSGSGKKTLIIALLRQIFG
PSADKVKVENRAWKVDAGSRTIDIELTTLSSTNHIELNPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSKVTEAIRSR
CLNVRINAPTEEQIMKVLEFIGKKEGLQLPSGFAARIAEKSNRSLRRSILSLETCRVQQY
PFTSNQAIPPMDWEEYVSEIASDVMKEQSPKRLYQVRQKLYELLLNCIPPEIILKRLLYE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKGFLIAAFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggtggacaagtacagacccaaaaccctagaccaggcaatggtccaccaagat
atcgcacaaaacctcaagaaacttgtctcagagcaggactgcccccatttgctcttttat
ggcccttctggttccggcaagaaaaccctaatcatcgcccttcttcgtcagattttcgga
cccagcgccgataaggtgaaggtggaaaacagggcatggaaagttgatgctggaagtaga
accattgatatagagctgactacattatcgagcaccaaccatattgaactgaaccccagt
gatgcagggtttcaggacagatatattgttcaagagataattaaagaaatggctaaaaat
agacccattgacacaaaagggaaaaaaggatataaagtcttagtgctgaatgaagttgac
aaactttcaagagaagctcaacattctcttcgaagaactatggagaaatatagtgcctat
tgcaggctaatactatgctgtaacagctcttcaaaggttactgaagcaatccggtctcgg
tgtcttaatgtgcgaataaatgcaccgacagaagaacagattatgaaagtattggagttc
attggaaagaaagaagggctgcagcttccttctggatttgctgctcgtatagctgaaaaa
tcaaataggagcttaaggagatctatattgtcattagaaacttgtcgtgttcaacagtat
ccctttacaagtaaccaggcaatacccccaatggattgggaggaatatgtttctgaaatt
gcatctgatgtaatgaaggagcagagcccaaaaaggctttatcaggtgcggcaaaaattg
tatgagctacttcttaattgtattcctccagagatcatcttgaagaggcttctttatgag
ttattgaagaagttggatgcagagttgaagcacgaggtctgccattgggctgcatattat
gaacataggatgcgtcttgggcagaaagctatatttcaccttgaagcattcgtggccaag
ttcatgagcatttacaagggtttcctcattgcagcatttggttga
DBGET
integrated database retrieval system