Prunus avium (sweet cherry): 110759598
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Entry
110759598 CDS
T05161
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03030
DNA replication
pavi03410
Base excision repair
pavi03420
Nucleotide excision repair
pavi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110759598
03410 Base excision repair
110759598
03420 Nucleotide excision repair
110759598
03430 Mismatch repair
110759598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pavi03032
]
110759598
03036 Chromosome and associated proteins [BR:
pavi03036
]
110759598
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110759598
DNA replication proteins [BR:
pavi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110759598
DNA Replication Termination Factors
ELG1-RFC complex
110759598
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
110759598
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110759598
Check point factors
HRAD17(Rad24)-RFC complex
110759598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Mg_chelatase
AAA_16
Rad17
Viral_helicase1
RCF1-5-like_lid
AAA_24
RuvB_N
AAA_11
AAA_5
nSTAND3
AAA_25
AAA_19
AAA_assoc_2
AAA_28
MeaB
DNAX_ATPase_lid
AAA_3
AAA_30
ABC_tran
bpMoxR
RNA_helicase
IstB_IS21
AAA_18
KTI12
AAA_7
NTPase_1
DO-GTPase1
SRP54
SLFN-g3_helicase
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
110759598
NCBI-ProteinID:
XP_021817373
UniProt:
A0A6P5SUN4
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MASSSSSSSSAYDMPWVEKYRPSNVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGK
TTSILALAHELLGPNYKQAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCALVRFSRLSDLEILGRL
MIVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLH
VKNMVCNVLEGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETGF
AHMRICDGVGSYLQLCGLLAKLSLIRETAKAT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcttcttcttcttcgtcatcagcctacgacatgccatgggtggagaagtac
aggcccagcaatgtcgccgacattgtgggcaacgaagatgccgtgtctaggcttcaggtc
atcgctcgcgacggcaacatgcccaacctcatcttggccggtcctcctggaactggtaag
accactagtatactcgctcttgcgcatgagcttttgggaccgaattataagcaggctgtt
ttagagctgaatgcatccgacgacaggggaatagatgttgtgaggaacaaaattaaaatg
tttgctcaaaagaaagtcacattgcctcctgggcggcataaagttgtcatcttggatgaa
gctgacagtatgacatctggagcacaacaagctttgaggcggacaatggaaatatattca
aattccactcgttttgctcttgcgtgcaatgtatcttccaaaattattgagcctattcag
agtagatgtgcccttgtccgattttctagattatctgatctggagatacttggtcgccta
atgatagtggttcaagctgaaaaggttccctatgttccagaaggtcttgaagccattatt
ttcactgctgatggtgatatgaggcaggcactgaataacctgcaagctacaaacagtgga
ttccggtttgtcaaccaagaaaatgttttcaaggtctgtgaccagcctcatccattgcat
gtaaagaatatggtgtgcaatgtgcttgaagggaaatttgatgatgcttgttcaggtctc
aagcagctctatgatttgggctactccccaactgacataatcacaacctttttccgtatc
ataaagaattatgatatggctgagtatttgaaattggaattcatgaaggaaacaggtttt
gctcacatgagaatctgtgatggagttggctcctaccttcagctgtgtggtcttctggct
aagctttccctaattcgtgagacggctaaagcgacataa
DBGET
integrated database retrieval system
