Prunus avium (sweet cherry): 110760279
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Entry
110760279 CDS
T05161
Name
(RefSeq) protein GIGANTEA isoform X1
KO
K12124
GIGANTEA
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110760279
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Ortholog
Paralog
GFIT
Motif
Pfam:
Dimerisation
Motif
Other DBs
NCBI-GeneID:
110760279
NCBI-ProteinID:
XP_021818210
UniProt:
A0A6P5SMU9
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All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MAATSERWIDRLQFSSLFGPPPQDALRRKAQVTAYVDYFGQFTSEQFPEDIAELIRNRYP
SEVKRLFDDVLAMFVLHHPEHGHAVILPIISCLIDGTLAYERISPPFASFISLVCPSSEN
EYSEQWALACGEILRILTHYNRPIYKVEQQNSETERSSSGSHATTSDSVDGESSHIPLVQ
QERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELKPPSTASSRGSGKHPQ
LMPSTPRWAVANGAGVILSVCDEEVARYETATLTAVAVPALLLPPPTTALDEHLVAGLPA
LEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGIR
LPRNWMHLHFLRAIGTAMSMRAGIAADAAAALLFRILSQPALLFPPLRQVDGVEVQHEPL
GGYISSYKKQIEVPEAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSAV
DLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVEAILQRTFPPE
SSREQNRKTRYLFGIGSTSKNLAVAELRTMVHSLFLESCASVELASRLLFVVLTVCVSHE
AQSNGSKKARVEESYPADESVEESQKMSDKQRNRTKKTKKQGPVAAFDSYVLAAVCALAC
ELQLFPLISKGINHAHSKDAKNVAKPAKENVCTNEFRSSVDSAVCHTRRILAILEALFLL
KPSSIGTSWSYSSNEIIAAAMVAAHVSELFRWSKACMHALSVLMRCKWDSEICSRASSLY
NLIDFHSKAVASIVNKAEPLEAHLMQVPIWRDSFGCFEGRKLSQGGNSRCLNVGQPSALQ
CEDSAHSETKHKSESASHSFEGSGNTSGKGVANFPLDASDLANFLTMDRHIGFNCSAQVL
LRSVLTEKQELCFSVVSLLWHKLIAAPETQPSAESTSAQQGWRQVVDALCNVVSATPAKA
ATAVVLQAERELQPWIAKDDDQGQKMWRINQRIVKLIVELMRIHDSPESLVILSSASDLL
LRATDGMLVDGEACTLPQLELLEATARAIQPVLEWGESGLAVADGLSNLLKCRLPATIRC
LSHPSAHVRALSTSVLRDILQTSSIRPNPNPVEINGIHGPSYKYFNLDVIDWQADVEKCL
TWEAHSRLATGMPIKFLDTAAKELGCSISL
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacatctgaaagatggattgatcgtctgcagttctcctcattgtttgggccg
cccccgcaagatgccctgcgacggaaggctcaagttactgcctatgtggactactttggt
cagtttacatcagaacagtttcctgaggacattgccgagctgatccgtaaccgttatcca
tcggaggtgaagcgtctctttgatgatgtcctggctatgtttgtccttcatcaccctgag
catgggcatgctgttatccttccaattatttcatgtctcattgatggtacgctggcatat
gaaaggatcagtccaccatttgcttctttcatatcgttggtctgcccaagcagtgagaat
gagtattctgagcagtgggctctggcatgtggggagattttacgaatcttaactcattac
aatcgccccatatacaaggtggagcaacagaatagtgaaacagaaagaagcagtagtggt
agccatgctacaacaagtgactccgttgatggtgaatccagccatatacctttggtacaa
caagagaggaaacctataaggcctttgtctccttggattactgatatattgcttgctgca
cctctaggtatcagaagtgattacttccgctggtgtagtggggttatgggaaaatatgct
gctggagaactcaagccaccatcaactgcttcttctcgtggatctggaaaacatccccag
ctcatgccatcaactccaaggtgggcagttgctaacggtgctggagttatattaagtgtt
tgtgatgaggaagttgctcgctatgagactgctactttgacggcagtcgctgtccctgca
ctcctacttcctcctccaacaacagctttggatgagcacctagtagcggggttacctgct
cttgagccatatgcacgcttatttcataggtattatgctattgctactccaagtgccacc
caaagacttcttcttggccttctagaagcaccaccatcatgggctcctgatgcacttgat
gcagctgtacagcttgtggaactccttcgtgctgctgaagattatgcatctggcataagg
cttcctaggaactggatgcatctgcatttcctgcgtgcaattggaaccgcaatgtccatg
agagcgggcatagcagctgatgctgcggcagctttacttttccgaatactctcacagcct
gcattgcttttccctccactaagacaagttgatggagttgaagttcagcatgagcctttg
ggtggttacatctcaagctacaagaagcagattgaagttcctgaggctgaagcaacaatt
gaagctactgcccaagggattgcttctatgctctgtgcccatgggcctgaggttgaatgg
cgaatttgtaccatatgggaagctgcgtatggcctcattcctttaagttcctctgcagtt
gaccttcctgagatcattgtcgccactccattacaacctccaatattatcatggaatctg
tatatacccctccttaaggtcttggaatatctacctcgtggaagtccgtctgaggcatgc
cttatgaagatatttgttgccactgttgaagcgattcttcagagaacatttccgcctgag
tcatcaagagagcaaaacaggaaaacaaggtacctttttggcataggttcgacctcaaaa
aacctggctgtggcagagcttcgtacaatggttcattcactattcttggaatcatgtgcc
tcggtagagcttgcttcacgcctactgtttgttgtgctaactgtatgcgtcagtcatgaa
gctcagtccaatggaagcaagaaagcaagagttgaagaaagctacccagctgatgagagc
gttgaagaatcacaaaagatgtcagataagcagagaaacagaactaaaaagacaaaaaaa
caggggcctgtagcagcatttgattcttatgttctggctgctgtttgtgctcttgcatgt
gagcttcagttgttccctttgatttcgaaggggattaatcatgctcactctaaagatgca
aaaaatgtggcaaagcctgccaaagaaaatgtatgtactaatgagtttcggagtagtgtt
gactcagcagtttgtcacacacgcagaatattagccattttggaggcacttttcttgctg
aagccatcttccattggcacttcgtggagttacagttcaaatgagataattgcagcagcc
atggttgcagctcatgtttctgaattatttagatggtcaaaagcttgcatgcatgcactc
tctgtcttgatgcgatgtaagtgggacagtgaaatttgctccagagcctcatcattatac
aacctcattgatttccacagtaaggctgttgcatctatcgttaacaaggctgaaccattg
gaagcacacttgatgcaagttccaatttggagggattcctttgggtgttttgaaggcaga
aaactaagtcaaggtggaaacagtagatgcttaaatgtagggcagccatctgccttgcag
tgtgaggattcagcacattcagaaactaaacacaaatctgagagtgcatcacattcattt
gaggggtcgggaaatacctccggtaaaggtgtagcaaatttcccattagatgcttcagat
ttggccaactttcttactatggacaggcatatcggatttaattgcagtgcacaggttctt
ctaagatcagtactcacagaaaaacaagagctatgtttctcagttgtctcactgttgtgg
cacaagttaattgcagctcctgaaacccagccttctgcggaaagcacttctgctcaacaa
ggatggcggcaggtcgttgatgcattatgcaatgttgtgtcagcaacaccagcaaaagca
gccactgcagtggttcttcaggcggagagggaattgcagccttggattgccaaagatgat
gatcaaggtcagaagatgtggagaatcaaccagaggattgtaaaattgattgtggagttg
atgagaattcatgatagcccagagtcattggtaattttgtcaagtgcctcagatctactt
ttgcgtgccactgatgggatgcttgttgatggagaagcttgcaccttaccccaactagag
ctactggaagcaacagctagagcaattcagcctgtgctcgagtggggagaatctgggctg
gcagtcgcagatggcctttcgaacctgttaaagtgtcgtctgccagctaccatccgatgc
ctttctcatccgagtgcacatgttcgtgctctgagcacatcagttcttcgtgatattttg
caaaccagttcaattagacctaaccctaatccggtggaaataaatggtattcatggtcct
tcctacaagtattttaacttagatgtgattgactggcaagctgatgtggaaaagtgcttg
acatgggaagctcatagccgacttgcgactggaatgcctataaaatttcttgatactgcc
gccaaagaattgggttgtagtatttccttatga
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