KEGG   Prunus avium (sweet cherry): 110760349
Entry
110760349         CDS       T05161                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3A
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110760349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pavi03021]
    110760349
   03036 Chromosome and associated proteins [BR:pavi03036]
    110760349
Transcription machinery [BR:pavi03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     110760349
Chromosome and associated proteins [BR:pavi03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    110760349
   PBAF complex
    110760349
   GBAF(ncBAF) complex
    110760349
SSDB
Motif
Pfam: SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 110760349
NCBI-ProteinID: XP_021818287
UniProt: A0A6P5SVY3
LinkDB
Position
Unknown
AA seq 566 aa
MELAPHDPGSKLLRPDEPELDLYTIPSHSSWFSWDEIHETERIALKEYFDGSSISRTPKT
YKEYRDFIISKYREDPSRKLTFTEVRKSLVGDVSLLHKVFNFLEKWGLINFSANLGVNGG
FGIEGEERSKVKVEDGVPNGIRVAAMPNSIKPISLISAPPKVGDAGGGVVNRITLAPLAP
LASYSDVFGDLKKEEGLVCGNCGGHCETGHYKYSKGDFLICIKCFENGNYGENKLRDDFK
LNEAIEKSGTNGVEWTESETLLLLESVLKHGDDWELVAQNVQTKTKFDCIAKLIDLPFGE
LVLGSAYRKGNPSGFSGNLISSEHIQLSSSECQETVKTKGQLHEQTDDSKQNGDILDQGP
PLKRQRIASLSDASSSLIKQVAAITTMVGPHITSAAAEAAVNALCEETSCSREIFNADDD
SIPNGLWSPAKNCETERAHGEDSEMKERPTQSESQHAIFKKDDIPPTLQIRAAIGTALGA
AAAHAKLLADQEDRQIEHLMATIIGTQMKKLHSKLKHFEDLELIRKKECAQIEEVEDILV
EERINILQRTFDSGVPRWRDHPSLKS
NT seq 1701 nt   +upstreamnt  +downstreamnt
atggaacttgctccacacgacccgggttctaaactgctccgacccgacgaaccagagctc
gacctctacaccatcccaagccactctagctggttttcgtgggatgagattcatgaaact
gagagaattgctttgaaagagtactttgatggaagctcaatttcaagaacgccaaaaaca
tacaaggaatacagggactttattattagtaagtacagagaagacccttctaggaaactc
acattcactgaggttagaaagtcacttgtgggtgatgttagtttgctccacaaggtcttt
aatttcttggagaagtggggtttgattaatttcagtgcaaatttgggtgtcaacggtggt
tttggcatcgagggtgaggagaggtctaaggttaaggttgaggatggggtccccaatggg
atccgtgtggctgcgatgccgaattcaattaaaccaatttcactcatttcagctccccct
aaagttggggatgctgggggtggagttgtgaatagaattactttggctccattggctcca
ttggcatcatattctgatgtttttggtgatctaaagaaggaggaggggttggtttgtggc
aattgtggtggacattgtgaaactggacactacaagtatagcaagggtgattttctaatt
tgcataaaatgttttgaaaatgggaactatggggagaacaaattgagggatgatttcaag
ttaaatgaggcaattgaaaagagtggtactaacggagtggagtggactgaatctgaaact
ctactacttttagaatctgttctgaagcacggggatgattgggagcttgttgctcaaaat
gttcagaccaagactaaatttgattgtattgctaagctcattgatctgccttttggggag
cttgtgttgggttctgcctacagaaaaggcaatcctagtggctttagtggtaatttgatc
tcttcagagcacattcagttatcttcatctgaatgtcaagagactgtcaaaaccaaaggt
cagttgcatgagcagacagatgacagcaagcagaatggagatattttggatcaaggccct
cctttgaaaaggcagcgcattgcttccctttcggatgctagtagttcactgattaaacag
gtagctgccataacaaccatggttggtccacatattacatctgccgcagctgaggctgcc
gttaatgcactttgtgaagaaacctcttgttcaagggagatatttaatgctgatgatgat
tctattcctaatggcttgtggtctcctgctaaaaattgtgagacagagagagctcatggt
gaggattcagaaatgaaggaaaggccaactcaatcagagagtcagcatgcaatctttaaa
aaagatgacatacctccaactttgcaaattagagctgccattggaacagctcttggagca
gctgctgctcacgcaaaattattggccgatcaggaggatagacagattgaacatctaatg
gcaaccataattgggacgcagatgaagaagttgcacagcaaactcaagcattttgaagat
ctggagctgatcaggaagaaggaatgtgctcaaatcgaagaagtagaggatattctagta
gaagagcggattaatatcttacagaggacatttgattctggtgtacctagatggagggat
catccttctttaaaatcttga

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