Prunus avium (sweet cherry): 110760349
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Entry
110760349 CDS
T05161
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110760349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110760349
03036 Chromosome and associated proteins [BR:
pavi03036
]
110760349
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110760349
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110760349
PBAF complex
110760349
GBAF(ncBAF) complex
110760349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
110760349
NCBI-ProteinID:
XP_021818287
UniProt:
A0A6P5SVY3
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MELAPHDPGSKLLRPDEPELDLYTIPSHSSWFSWDEIHETERIALKEYFDGSSISRTPKT
YKEYRDFIISKYREDPSRKLTFTEVRKSLVGDVSLLHKVFNFLEKWGLINFSANLGVNGG
FGIEGEERSKVKVEDGVPNGIRVAAMPNSIKPISLISAPPKVGDAGGGVVNRITLAPLAP
LASYSDVFGDLKKEEGLVCGNCGGHCETGHYKYSKGDFLICIKCFENGNYGENKLRDDFK
LNEAIEKSGTNGVEWTESETLLLLESVLKHGDDWELVAQNVQTKTKFDCIAKLIDLPFGE
LVLGSAYRKGNPSGFSGNLISSEHIQLSSSECQETVKTKGQLHEQTDDSKQNGDILDQGP
PLKRQRIASLSDASSSLIKQVAAITTMVGPHITSAAAEAAVNALCEETSCSREIFNADDD
SIPNGLWSPAKNCETERAHGEDSEMKERPTQSESQHAIFKKDDIPPTLQIRAAIGTALGA
AAAHAKLLADQEDRQIEHLMATIIGTQMKKLHSKLKHFEDLELIRKKECAQIEEVEDILV
EERINILQRTFDSGVPRWRDHPSLKS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgctccacacgacccgggttctaaactgctccgacccgacgaaccagagctc
gacctctacaccatcccaagccactctagctggttttcgtgggatgagattcatgaaact
gagagaattgctttgaaagagtactttgatggaagctcaatttcaagaacgccaaaaaca
tacaaggaatacagggactttattattagtaagtacagagaagacccttctaggaaactc
acattcactgaggttagaaagtcacttgtgggtgatgttagtttgctccacaaggtcttt
aatttcttggagaagtggggtttgattaatttcagtgcaaatttgggtgtcaacggtggt
tttggcatcgagggtgaggagaggtctaaggttaaggttgaggatggggtccccaatggg
atccgtgtggctgcgatgccgaattcaattaaaccaatttcactcatttcagctccccct
aaagttggggatgctgggggtggagttgtgaatagaattactttggctccattggctcca
ttggcatcatattctgatgtttttggtgatctaaagaaggaggaggggttggtttgtggc
aattgtggtggacattgtgaaactggacactacaagtatagcaagggtgattttctaatt
tgcataaaatgttttgaaaatgggaactatggggagaacaaattgagggatgatttcaag
ttaaatgaggcaattgaaaagagtggtactaacggagtggagtggactgaatctgaaact
ctactacttttagaatctgttctgaagcacggggatgattgggagcttgttgctcaaaat
gttcagaccaagactaaatttgattgtattgctaagctcattgatctgccttttggggag
cttgtgttgggttctgcctacagaaaaggcaatcctagtggctttagtggtaatttgatc
tcttcagagcacattcagttatcttcatctgaatgtcaagagactgtcaaaaccaaaggt
cagttgcatgagcagacagatgacagcaagcagaatggagatattttggatcaaggccct
cctttgaaaaggcagcgcattgcttccctttcggatgctagtagttcactgattaaacag
gtagctgccataacaaccatggttggtccacatattacatctgccgcagctgaggctgcc
gttaatgcactttgtgaagaaacctcttgttcaagggagatatttaatgctgatgatgat
tctattcctaatggcttgtggtctcctgctaaaaattgtgagacagagagagctcatggt
gaggattcagaaatgaaggaaaggccaactcaatcagagagtcagcatgcaatctttaaa
aaagatgacatacctccaactttgcaaattagagctgccattggaacagctcttggagca
gctgctgctcacgcaaaattattggccgatcaggaggatagacagattgaacatctaatg
gcaaccataattgggacgcagatgaagaagttgcacagcaaactcaagcattttgaagat
ctggagctgatcaggaagaaggaatgtgctcaaatcgaagaagtagaggatattctagta
gaagagcggattaatatcttacagaggacatttgattctggtgtacctagatggagggat
catccttctttaaaatcttga
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