KEGG   Prunus avium (sweet cherry): 110760526
Entry
110760526         CDS       T05161                                 
Name
(RefSeq) uncharacterized protein LOC110760526
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03020  RNA polymerase
pavi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110760526
  09124 Replication and repair
   03420 Nucleotide excision repair
    110760526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pavi03021]
    110760526
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110760526
   03400 DNA repair and recombination proteins [BR:pavi03400]
    110760526
Transcription machinery [BR:pavi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110760526
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110760526
DNA repair and recombination proteins [BR:pavi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110760526
SSDB
Motif
Pfam: SHS2_Rpb7-N Vg_Tdu
Other DBs
NCBI-GeneID: 110760526
NCBI-ProteinID: XP_021818499
UniProt: A0A6P5SQT1
LinkDB
Position
Unknown
AA seq 165 aa
MVGWIKQLVYFHLLCSGQHGFVVAITGVENIGKGLIHNGTGFVTFLVKYQCVVFTPFKGE
ILEAVVTMVNKKILSYLVNVNGEAEELESPVDEGGGDHEVRVKGADDDPAEGVLALGVEP
VPEVVEALLGQVKGSAVIEIGIELVDHGLVAKDAEEAHNEGEDVD
NT seq 498 nt   +upstreamnt  +downstreamnt
atggtgggatggataaagcaattggtatattttcatcttttgtgcagtggtcaacatggg
tttgtggttgcaattacaggcgtagaaaacattgggaaggggttgattcacaatgggaca
gggtttgtcacattcctcgtgaagtaccagtgtgttgttttcacaccattcaaaggggag
atcttagaagctgttgttactatggtgaacaagaaaattttgtcttaccttgtgaatgtg
aatggcgaagctgaggaattggagagtccagtagatgagggcggcggtgaccatgaggtc
agggtaaagggtgccgacgatgatccggccgagggggtactagctctcggagtcgaacca
gttccagaagtcgtagaagcccttctcggtcaagtaaagggtagtgcagtaattgaaata
gggatcgaactcgtggatcatggactcgtagcgaaggacgctgaagaggcacataatgaa
ggcgaggatgtagactaa

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