KEGG   Prunus avium (sweet cherry): 110760761
Entry
110760761         CDS       T05161                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
pavi  Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pavi03036]
    110760761
   03400 DNA repair and recombination proteins [BR:pavi03400]
    110760761
Chromosome and associated proteins [BR:pavi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110760761
DNA repair and recombination proteins [BR:pavi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     110760761
SSDB
Motif
Pfam: MMS19_N MMS19_C ATG22 Exo_endo_phos_PGAP2IP HEAT_EZ
Other DBs
NCBI-GeneID: 110760761
NCBI-ProteinID: XP_021818772
UniProt: A0A6P5SXA3
LinkDB
Position
Unknown
AA seq 1159 aa
MAETTELIQHIELYVDTSRSPTEQAASLNSIISLVKSDFLTIEVLVKEMRMYLTTTDNVI
RARGILLLAEVLTGLASKPLDNATIHSLIGFFTDRLADWRALRGALVGCLALLRRKVNAG
MVSTSDAKLVAQSYIESLQVQSLGQHDRKLCFELLECLLERHPNEIASLGETFFYGICQA
MDGEKDPHCLMLTFPIVETLVRIYPDPSGSLASFCGDLFELLGSYFPIHFTHLKDEDAEV
KRDDLSKALMSAFSSTPLFEPFVIPLLLEKLSSSLPLAKVDSLKYLNHCTAKYGADRMAK
HAGAIWISLKDAISNSLEKPAMPFTSEPLYGLGFQENEIATEALMLLQKVTLQNEALFLS
LIIQDEGINIVFNSIASHEHYNNISLQGKQWLHAVGRILYIISKTSMASCNSVFESFFPR
LMNTLEISVTNSSGDCTLNENSFPSKKFNFGALYLCVELIAACRDLIMRSKDLAPKPDTS
QETCRYMLHMFADSLVNAFSSSLATNANEVAHGADIYFKVKGLQILATFPGDFLPISKFL
FANILTILMSIILVDFNKILLWKLVLKALVHIGSFVDMYHESEKALGYMGAVVDKTVSLV
SRDDFNVPFSLKLEAVSEIGASGRNHMLKIAQGMEEAIVAKLSDYVHGNLKSAEKTIQLL
ECYCNKILSWINETGGLEEVLLRFVINIWNCIESCKGFSIQVQEEELLDATMMAMKLATG
SCSEESQNIIIHKAYSVISSSISIPFKESLDATSSIQLEELRVSEQIDKSSHRDDQIDKF
SLRHEWILSLFASVIIAVRPKAQIANVKGILHLFMTTLLKGCVPAAQASGSVINKLGTKS
HETANSNDCTLEEAVDMIFRTKLWNLNENGVLRTCGSGNGSKVGLTDLCLGFSSNKLLQV
HAIVGLAWIGKGLLLLGHEKVKDVTKILLECLLSEVRIRAMELKQGLLENSYEQHAVMRS
AADAFHILMSDSEVCLNRKFHAIARPLYKQRFFSTVMPILQSWIIKSDSSVCRSMLFRAS
AHLISNAPLIVILSEAKKLMPVLLDGLSLLSEDILDKDKLYSLLLVLSGILTDKNGQVAV
IENAHILVNCLTRLIDYPHMMLVRETALQCLLATSELPYARIFPMRTQVLQAICKALDDP
KRAVRQEAVRCRRAWASIA
NT seq 3480 nt   +upstreamnt  +downstreamnt
atggccgaaaccaccgaattgattcagcacattgagttgtacgtcgacacgtctcgctct
cctaccgagcaggctgcaagcttgaattcaatcatttctctcgtgaagagtgacttttta
actattgaagtgctggtgaaagagatgaggatgtatttgaccactacggataatgtgatc
cgtgctcggggtatacttcttctggcagaagttcttacaggtctcgcatcaaagccacta
gataatgcaactattcatagcttgataggattcttcacagacagactggcagattggaga
gctttacgtggtgcgcttgtcggttgcttggcactgctgaggaggaaagttaatgctgga
atggtctcgaccagtgacgcaaaactggttgctcagtcttacatagagtccctacaggtg
caatctttagggcagcatgacagaaagctttgctttgagcttttggaatgccttttagaa
cgccatccgaatgagattgcttcgctgggtgaaacctttttttatgggatctgtcaagct
atggatggagaaaaggatcctcattgcttaatgttaacatttccgattgttgagactctg
gtgcgaatatatccagacccatctggctcacttgcaagtttttgtggagatctatttgaa
ttattgggatcttactttcccattcattttactcatctcaaagatgaggacgctgaggtg
aaaagggatgacctttcaaaggcactaatgtcagcattctcgtccacgcctttattcgaa
ccatttgtcattccattgcttcttgagaaactttcttcgtctctgccattagcaaaggtt
gattctttgaagtatcttaaccactgcacggctaaatatggagctgacagaatggcaaaa
catgctggagctatttggatttcactgaaagatgcaataagtaattcattggaaaagcct
gctatgccctttacttcagaaccactatatggtcttggctttcaagagaatgaaattgca
acagaagctctaatgcttctacagaaggttaccctgcaaaatgaggctttgtttttaagt
ttgattattcaggatgaaggtataaacatagttttcaactccatagccagtcatgaacat
tataataatatttccttgcaaggcaagcagtggttacatgcagtcggtcgcatcctttat
ataatatccaagacttccatggcttcctgtaacagtgtgtttgaaagtttcttccctcgc
ttaatgaacacgcttgagatttctgtgacaaattcctctggggattgcactcttaatgag
aattcttttccctcaaaaaagtttaattttggagctctttatctctgcgtggaattaatt
gcggcatgcagagatttaattatgagatcgaaagaccttgctccgaagcctgatacttca
caggagacatgtcgctacatgcttcacatgttcgcggattcactagtcaatgccttttct
tcttccttggccacgaatgctaatgaagttgctcatggtgcagatatttatttcaaagtg
aagggtttacagattctggctacattccctggagatttcttgccaatatctaaatttttg
tttgcgaatattctgacgatactcatgtcaatcatcttagtggatttcaacaagatattg
ctatggaagctagtgttgaaagctttagtccacattgggtcattcgttgatatgtatcat
gagtctgagaaggcactaggctatatgggtgctgttgttgacaagactgtttcattggtg
tctcgtgatgattttaatgtgcctttttcactaaaactggaggcagtctctgagattggt
gcaagtgggcgaaatcatatgctaaaaattgcacaagggatggaagaggcaatagtggcc
aagttatctgattatgtccatggaaatttgaagtcagctgaaaaaacaatccaactgttg
gaatgctactgtaataagattctttcatggatcaatgaaacaggaggtctcgaggaagtt
ctgttgcggtttgtcattaatatatggaattgcattgaaagttgcaaaggttttagcatt
caagtccaggaagaagaacttcttgatgcaaccatgatggcaatgaagcttgccactggg
agttgttcagaagaaagccagaacattataatccacaaggcttacagtgttatttcatca
agcatatccattccatttaaggaatccctggatgccacctcttccattcagcttgaagaa
ttgcgtgtttctgaacagatagacaaatcttctcatagggatgaccagatagacaaattt
tctcttaggcatgaatggattctttcactttttgcatcagtaatcatagcggtgcgtcca
aaagcacagattgcgaatgtaaaaggaatattgcatttgtttatgacaacccttcttaaa
ggatgtgttccagcagctcaggcttcgggttctgtgatcaacaaattgggtacaaaatcc
catgaaacagcaaattcaaatgactgtaccttggaagaagcagtggatatgatttttaga
acaaaattatggaatctcaatgaaaatggagttttacggacatgtggatcaggtaatggc
agtaaagttggtcttactgatttatgccttggtttttcgagcaataaactgcttcaagtc
catgccattgttggattagcatggatagggaaaggtttgcttctacttggtcatgaaaaa
gtaaaagatgtaaccaaaattctgttggagtgcttactgtcagaagtaagaatacgtgcc
atggagttgaagcaaggtttgttagaaaacagttacgagcagcacgctgtgatgagaagc
gcagcagatgcatttcatattcttatgagtgattctgaagtttgtttgaaccgaaaattt
catgccatagcacggccactctacaagcagcggtttttctctacagtgatgcctattctg
cagtcttggataataaaatctgattcatcagtatgcagatctatgctgtttcgggcatcc
gcgcaccttatatctaatgctccattaattgttatcttgagtgaagccaagaagctcatg
ccagtactgttggatggattgtccctgcttagtgaagatattctggataaagataagcta
tatagtcttctgctagtcctttctggaatattgacagataaaaatggacaagtggctgtc
atagagaatgcacacattttagttaattgcctcaccagacttattgactacccacatatg
atgcttgttagagagactgcacttcaatgtcttcttgcaacatctgagctgccatatgca
agaatctttcccatgagaacacaggtacttcaagcaatatgtaaggctcttgatgatcca
aagagggctgttcgtcaggaagctgtcaggtgtaggcgagcatgggcatcaattgcgtaa

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