Prunus avium (sweet cherry): 110761155
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Entry
110761155 CDS
T05161
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110761155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110761155
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110761155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110761155
NCBI-ProteinID:
XP_021819252
UniProt:
A0A6P5SYP2
LinkDB
All DBs
Position
Unknown
AA seq
243 aa
AA seq
DB search
MEIDRLDGRTPNQLRPLACSRNVLNRAHGSASWCQGDTKVLVAVYGPKAGTKKNENPEKA
CIEIIWKPKTGQSGKLEREYEMILKRTLQSICILTLNPNTTTSVIIQVVNDDGALLPCAI
NAACAALVDAGIPLKHLAVAICCCLAESGYVILDPSKLEEQKMKAFAYLVFPNSVLSILP
EEQLQVGGEPMEHGIITSVTQGAMSVDDYLHCLERGRAATAKMSAFLRKSLQPQLPIDSS
KAG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggagatagatagactcgatggtcgtacaccgaaccagttgaggccattggcttgttct
cgcaacgtcctcaaccgtgctcatggctccgccagctggtgtcaaggagataccaaagtt
ctcgttgcggtttatggacctaaagcgggaacaaagaagaatgaaaaccctgaaaaagct
tgcattgagattatttggaagccaaaaacaggccagagtggaaaactggaaagggaatat
gagatgatactaaagaggacattgcaaagcatctgcatactgactctcaatccaaatacc
acaacctcagttattattcaggttgtcaatgatgatggtgctcttctgccatgtgccata
aatgccgcatgtgctgcccttgttgatgccgggattcctctaaagcatcttgctgttgcc
atttgttgttgcctcgcagagagtggatacgtcatattggaccctagcaagctggaagag
cagaaaatgaaggcgtttgcatatttggtctttccaaactcagttctttcaatccttcca
gaagaacaattacaggttggaggtgaacccatggagcatgggatcatcacctctgttacc
cagggtgcaatgtcagtggacgactatcttcactgtttagaacgagggcgtgctgccact
gcaaagatgtctgcttttctcaggaagagcttgcaaccacagcttccaatcgattcgtct
aaagccgggtga
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