KEGG   Prunus avium (sweet cherry): 110761374
Entry
110761374         CDS       T05161                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
  KO
K12897  transformer-2 protein
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110761374
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pavi01009]
    110761374
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pavi03041]
    110761374
Protein phosphatases and associated proteins [BR:pavi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110761374
Spliceosome [BR:pavi03041]
 Common components
  Common spliceosomal components
   SR proteins
    110761374
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded NMT_C
Other DBs
NCBI-GeneID: 110761374
NCBI-ProteinID: XP_021819529
UniProt: A0A6P5STH9
LinkDB
Position
Unknown
AA seq 242 aa
MADSPRKKYSRSPSPWRAQSRSRSRSWSRPRSRSRSWSRPRQRSRSRSRGRSRSRSPGRP
AAINPGNTLYVTGLSTRVSEKDVERHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSVED
AERCIKHLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKNTRDTGYRGDRDGDRDRDRD
RGRYRGGSGRDDYGYRRSPRRSPYRGGRDYSPRGSPYGGRSRRERSYSPYGSPERKYARG
SR
NT seq 729 nt   +upstreamnt  +downstreamnt
atggcggattctccacgcaaaaagtactcacgatccccttctccgtggagagctcagtcc
aggtccaggtccaggtcttggtctaggcctaggtcaaggtcaagatcgtggtctaggcca
aggcagagatctcgttctagaagtcgtggcagatcaaggtccagaagtcctggcaggcct
gctgctataaatcctggaaatacactgtatgtgactggcttatcaacaagggtctcagag
aaggatgttgaaaggcatttttcaaaggagggaaaggtagcttcatgctttcttgttgtg
gagccccgcactcgaatttctcgtggttttgcctttgttactatggactctgttgaagat
gctgaacggtgcattaaacatctcaaccagtcagttctggaaggtcgatacataactgtt
gagaggtctcggaggaagcggccaagaactccaacacctggccattatcttgggttgaaa
aatactagagacactggttatcgaggtgatcgggatggggatcgggatcgggatcgggat
cgtggtaggtatcgtgggggctcaggtcgtgatgactatggatatcggaggtctccaagg
cgctcaccgtacagaggtggccgtgattattctcctaggggttcaccttatggcggaaga
tctagaagggagaggtcttattctccctatggcagccctgaaaggaagtatgctcgtggc
tctagatga

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