Prunus avium (sweet cherry): 110761435
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Entry
110761435 CDS
T05161
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110761435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110761435
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110761435
mRNA degradation factors
5'-3' decay
Decapping complex
110761435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
110761435
NCBI-ProteinID:
XP_021819597
UniProt:
A0A6P5SZM1
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MSQTGKLMPNLDQQSTKMLNLTVLQRIDPFIEEILITAAHVTFYEFNIESNQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNP
RECEEVANLFTRILNAYSKVPPKSKVASSKSEFEELEAVPSMLVMEGPLEPSLNASTATD
APEDSSFVNYLAAMNIGGNTTNPTNSRQSYHSAGTVPASSYAPSAVSPPAPTPQPPPLSL
SVPSTPTPQHVPSDLTTSNNRVTNLIKPSSFFPLPASSSSLIIPPIASAVPTAAALHPPL
NLQRPYGTPMLQPFPPPTPPPSLTPNSAPLVPSDGPLINREKVREALLMLVQDDQFIDML
YQALLKVHHT
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagacggggaaattgatgccaaatctcgatcagcaaagcaccaaaatgctcaat
ctcacggtgctgcagagaatcgatcccttcatcgaagagattctgattacggccgcgcat
gtaaccttctacgaattcaacatcgagagcaatcaatggagtcgcaaggatgttgaaggg
tctctctttgttgttaaaaggaatactcaaccacggttccagttcattgtaatgaatcgg
cgtaatacagataacctagtggagaatctcttgggagattttgagtatgaagttcaagtt
ccatatttgttgtataggaatgcagcccaagaagttaatggaatttggttttataacccc
cgtgaatgtgaggaagttgcaaatctctttactaggatccttaatgcatactcaaaggtt
cctccaaagtccaaagtagcttcaagcaaaagtgagtttgaggaacttgaagcagtccca
tccatgttggtcatggaggggccactggagccatctttgaatgcctctactgccactgat
gcccctgaagattcttcctttgtgaactacctggcagctatgaatattggaggtaatact
acaaacccaacaaattcaagacagtcctatcattctgctggaactgttccagcgtcttcc
tatgcacccagtgctgtttcacctcctgcaccaactccacaaccaccacccctttccctt
tcagtcccatctacgccaaccccccagcatgtcccctctgatctaaccaccagcaacaat
cgagtcactaatcttataaagccctcttctttcttccctctccctgcttcctcatcttca
ttaattataccacctattgcttcagctgtgccaactgccgctgcacttcatcctcccctg
aatctgcaacgcccttatggtactccaatgcttcaaccctttccaccaccaactccccca
ccatctttaactcctaattctgctcctctggttcccagtgacgggcctcttattaacaga
gaaaaagttcgcgaagcactgctgatgctggttcaggacgaccaattcatcgacatgtta
taccaagcattgctgaaagtgcaccatacatga
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