Prunus avium (sweet cherry): 110761815
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Entry
110761815 CDS
T05161
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavi03009
]
110761815
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110761815
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
Pre-60S particles
Helicases
110761815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
110761815
NCBI-ProteinID:
XP_021820085
UniProt:
A0A6P5STC5
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MDADSFNPNSALSDTRFSDLKPPLSEPVLEALAQGGFEFCTPVQAATIPLLCSFKDVAVD
AATGSGKTLAFVVPLVEILRRASTVPKPQQVMGMIISPTRELSSQIYNVAKPFISTLPNF
KCVLLVGGGQVKADTKQIEEEGANLLIGTPGRLYDIMERMDGLDLRDLEILILDEADRLL
DMGFQKQINDIMSRLPKLRRTGLFSATQTEAVEELARAGLRNPVRVEVRAETKSNNSALS
QQLASSKTPSGLAIEYLECEADKKPSQLVDLLVKNKSNKTIVYFMTCACVDYWGLVLPLI
GPLKGFPLIALHGKMKQAARDKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDTPQ
DPNVFIHRVGRTARMGRQGSAIVFLLPKEEAYVEFLRIRRVPLQERKCSDDVSDVIPQIR
SAAKKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEVGKLGMGFGLLQLPAMPEVKH
HSLSTEGFIPVKDINLEEIKFKDKSREKQRKKNLQAKKEAKKQEVKPQKPNKSSNDTATQ
MRKKTAKQRRAAQTVEDEDELAREYRLLKKLKRGDIDESQFAKLTGTEDLL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgactcgttcaaccccaacagcgctctaagcgacacgcgcttctccgacctg
aagccgccactctctgagccggtcctcgaagccttagcccaaggcgggttcgagttctgc
acgccggttcaagccgctacaatccccttactatgcagcttcaaggacgtggcggtggac
gccgctaccggctcgggcaaaaccctagccttcgtggttccactggtggagatactccga
cgagcttcaacagttccaaaacctcagcaggtgatgggaatgattatatctccgactagg
gagctgtcttcgcaaatatacaacgtggcaaaacccttcatttcgacgctgccgaatttc
aagtgtgtgcttttggttggtggagggcaagtgaaagcagacacgaagcaaatagaggag
gaaggagccaatttgttgattggcactccagggagactatacgacattatggaacgcatg
gatggcttggatttgcgagaccttgagattttgattttagatgaggctgataggctcttg
gatatgggtttccagaagcagataaatgatattatgtcccgcttgccaaagcttcgtaga
actggtctcttttcagctacccaaactgaggcagttgaagagctggccagagcaggacta
aggaatcctgtgagagtcgaagtacgagcagaaacaaaatcgaataattcggcattgtcg
caacagttagcctcttcaaaaacaccttctggccttgccattgagtatctggagtgcgag
gcagacaagaaaccgtcacaacttgtggatctccttgttaagaataagtctaacaagacc
atagtatacttcatgacttgtgcttgtgttgactactggggacttgttcttccattgatt
ggtcctttaaagggtttccctttgattgctctacatgggaagatgaagcaggctgcaagg
gacaaagctttagcctcatttacatctctctcaagtggcatccttctatgtactgatgtt
gcagctcgtggactcgatattccaggtgttgactgtatagtgcagtatgatacccctcaa
gatccaaatgttttcatacatagagttggccgaacagctcgtatgggtagacaaggaagt
gcaatcgtttttctattgccaaaggaggaagcttatgtagaattcctgcggataagaaga
gtgcctcttcaagaaaggaaatgttctgatgatgtttctgatgttattcctcagatacga
tctgccgcaaaaaaggaccgtgatgtcatggaaaagggactcagggcatttgtttcttac
atccgtgcatataaagaacatcactgctcttacattttcaggtggaaagaacttgaagtt
gggaaactgggcatgggattcggactactgcagctccctgcaatgcctgaggtaaagcac
cactcgctttccacagagggtttcatccctgttaaagacatcaacttggaggagatcaag
tttaaggataaatctcgtgagaagcaaagaaagaagaatctgcaagcaaagaaagaagca
aaaaagcaagaagttaaacctcaaaaacccaacaaaagctcaaatgatacagctactcag
atgaggaagaaaacagctaagcaaagacgtgctgcccagacagttgaagatgaagatgag
ttggcaagagaataccgcttgctaaagaaactcaaaaggggggatattgacgaaagtcaa
tttgcaaagttaacaggaacggaagacttactttga
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