Prunus avium (sweet cherry): 110761843
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Entry
110761843 CDS
T05161
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03018
RNA degradation
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110761843
09123 Folding, sorting and degradation
03018 RNA degradation
110761843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110761843
03041 Spliceosome [BR:
pavi03041
]
110761843
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110761843
mRNA degradation factors
5'-3' decay
Lsm complex
110761843
Spliceosome [BR:
pavi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110761843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
110761843
NCBI-ProteinID:
XP_021820117
UniProt:
A0A6P5T0N2
LinkDB
All DBs
Position
Unknown
AA seq
151 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGGREDGPGGRQAKGIGRGLD
DGGSKGAGGGRGRGGPGGKAGGGRGGGRGRA
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgctccctctatctttgctgaagactgcccaagggcacccaatgctggtagaattgaaa
aatggggagacctacaatggccatttggtcaactgcgacacttggatgaacatccatctt
cgagaagtcatttgtacctccaaagatggagacaggttttggagaatgcctgaatgttac
atccgcgggaatacgataaagtatcttagagttcctgatgaggtgatagacaaagttcaa
gaagagaccaagagccgatcagataggaaaccacctggagtagggcgtggaagaggaaga
ggaggtagggaggatggccctggtggacgtcaggctaaaggcattggacgtggcctagat
gatggtggttctaagggtgctggtggaggccgaggcagaggtggaccaggtgggaaggcc
ggtggaggcagaggtggaggacgaggacgagcgtga
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integrated database retrieval system
