KEGG   Prunus avium (sweet cherry): 110762143
Entry
110762143         CDS       T05161                                 
Name
(RefSeq) protein STABILIZED1-like
  KO
K12855  pre-mRNA-processing factor 6
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110762143
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pavi03041]
    110762143
Spliceosome [BR:pavi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    110762143
 Complex C
   U5 SnRNP specific factors
    110762143
SSDB
Motif
Pfam: PRP1_N TPR_14 HAT_PRP39_N Suf HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_19 HAT_Syf1_CNRKL1_C TPR_16 TPR_CcmH_CycH HAT_Syf1_M TPR_2 TPR_8 ubiquitin TPR_1 PMC2NT ARM_TT21
Other DBs
NCBI-GeneID: 110762143
NCBI-ProteinID: XP_021820437
UniProt: A0A6P5SUB3
LinkDB
Position
Unknown
AA seq 982 aa
MVFIASPNHKTLTLNLNPNTTTLQSLKFQIEQISNVPVSHQRLFISQSLQLLTQRGSTLL
ADLGIKPYSTLTLHVPFFGGTLPHKNPKPRLDFHNSKPPEGYVAGLGRGASGFTTRSDIG
PARSALELPDRAIGQPEEAEEEKGYDESQQFDDFEGNDVGLLAPDAKLDEDDEKADAMWK
AVDERMDSRRKDRKEALLREEIEKYRASNPKITEQFASLKRNLHTLSAQEWESIPEIGDY
SMRNKKRRFESFVPVLDTLLEKATQEKELVTAIDPTSTDLTAVRQGRDIVLSLKLDRISD
SVSGLTVVDPKGYLTDLKSMSITSDTDIHDKNKARLLMMSLMKSNPKNPRVWISAARFEE
VAGKMKSARKLIQEGCEECPKSEDVWLEACRLASPKDAKAVIAKGVKFIPNSVNLWMEAA
KLEHDNLNKSRVLRKGLEHIPGSVRLWKAVVDLANEEDARSLLKRAVECCPLHIEFWLAL
TRLETYENAKKVLNKARENLSEEAAIWITAAKLEEANGNVSMVGKIIERGIRALQKTAVI
IDREAWMKEAEAAERAGSIMTCQAIIRSAIGIGVEEEDRKRTWVSDAEDFMKKGSIETAR
AIYAHALTVFLTKKSIWRKAAQLEKSHGTRESLVALLRKAVTYCPQAENLWLFGAKEKWL
AGDVPAARAILQEAYAAIPNSQEIWLAAFKLEFENHESERAKMLLAKARERGGNERVWMK
SAIVERELGNIDEERKFLVEGLKRFPSFFKLWLMLGQLEERLDHLEKAKKAYHSGLKHCP
NYLQLWLSLANLEEKMIGLSKARAVLTIARKKNPQNSELWLASVRAELRHGKKKESDILM
AKALQECPNSGILWAAALEMVARTQRKAKSKDALEKCRHDPHVVAAVAKLLWHDRKLDKA
RNWLNMAVTLAPDIGDFWALYYKFELQHGTEENQKDVLNRCVAAEPKHGEIWQPISKAVD
NSHQPIEAILKKVVAAAENNKQ
NT seq 2949 nt   +upstreamnt  +downstreamnt
atggtgttcatcgcatcccccaaccacaaaaccctaaccctaaacctaaacccaaacacc
accaccctccaatctctgaaattccaaattgaacaaatttccaacgtacccgtctctcac
cagcgcctattcatctcccaaagcctccaattgttgacccaaagaggctccaccctcctc
gccgaccttggcatcaaaccctactctaccctaaccctccacgtccccttcttcggtggc
accctaccccacaaaaatcccaaaccccgcctcgatttccacaattccaagcctcctgag
ggttatgtcgctgggcttggccgtggtgcttctgggttcaccacaaggtccgacattggg
cctgcccgatctgccctggagctgcccgatagggcaattgggcagcctgaggaagcagag
gaggaaaaagggtacgatgagagtcagcaatttgatgatttcgaaggcaacgatgttggg
ctgttggcaccagatgccaaactggatgaagatgatgaaaaggctgatgcaatgtggaaa
gcagttgatgagagaatggactccaggagaaaggacaggaaagaggctctgttgagagaa
gagattgaaaagtacagagcttccaatcccaagattacagagcagtttgcaagtttgaag
aggaatttgcacacattgtctgcccaagaatgggagagtatacctgaaattggggattat
tcaatgagaaacaagaagaggaggtttgagagctttgtgccggtgctggatacccttttg
gagaaggcaacgcaggagaaagagcttgttactgcaatagatcccactagtacagatttg
actgccgtgaggcagggcagagatatagtgttgtctttgaaattggataggatttcggat
tctgtctcggggttgacagttgttgacccaaaagggtatcttactgatcttaaaagtatg
agcatcacaagtgatacagacattcatgataaaaacaaggctagattgttgatgatgagt
ttaatgaagtcaaatcctaagaacccacgtgtgtggatttcggcagcaaggtttgaggaa
gtggcaggaaagatgaagtcagccaggaaattgattcaggaagggtgtgaggagtgtcct
aagagtgaggatgtgtggttggaggcttgtaggcttgctagccccaaagatgctaaggct
gttattgctaagggagttaaatttattcccaattcagtcaacttgtggatggaggctgcg
aaattggagcatgataatttgaacaagagcagggtcttgaggaaagggttggaacacatt
cctggttctgttaggctgtggaaggcggtcgtggatctagcgaatgaggaggatgctaga
agtctgctcaaaagggctgtggagtgttgtccattgcacattgaattctggcttgcactc
acaagattggaaacttatgagaatgccaagaaggtcctcaataaggcaagggagaatcta
tcggaggaggctgcaatttggatcaccgcagcaaagttggaagaagctaatgggaatgtg
tccatggttgggaagattattgaaagaggtattagggctttgcaaaaaacagcggttatt
attgatagagaagcatggatgaaggaggctgaagctgctgagcgtgcagggtctataatg
acttgccaagctatcattcggagcgcaattgggattggtgtggaggaggaagataggaag
aggacatgggtttctgatgcagaggacttcatgaaaaaaggttccattgaaacagcccga
gcaatttatgcgcacgcacttactgtcttcttaaccaagaagagcatatggaggaaagcg
gctcagcttgaaaagagccatggtactagggaatctcttgttgctttgcttcgtaaagcg
gtgacgtattgcccacaggctgaaaacttgtggctttttggtgctaaggagaagtggctt
gcaggggacgtgcctgctgcccgtgcaatcctccaagaagcttatgctgccattcccaac
tctcaagaaatttggcttgctgcatttaaacttgagtttgagaatcacgaatccgagaga
gcaaagatgcttcttgccaaagcccgagaaaggggaggtaacgaaagagtatggatgaaa
tctgcaattgttgagagggaattagggaacattgatgaggagaggaagtttcttgttgaa
ggcttgaagcgcttcccttcattctttaaattgtggttaatgcttggacagctagaggaa
cggcttgatcatttggaaaaagccaaaaaggcctatcactcaggtctgaagcactgcccc
aattatctacaactctggctttctcttgctaatctagaggagaaaatgattgggctgagt
aaagctcgcgcagttcttacaattgccaggaagaagaaccctcagaactctgaactgtgg
cttgcttctgttcgagctgaactgaggcatggcaagaagaaggaatctgatattttgatg
gcaaaggctttgcaggagtgtcccaatagtggtatcttgtgggcagcagctctcgagatg
gtagctcgtacccaacggaaggcaaagagtaaagatgcccttgagaaatgtcgtcatgat
ccccatgttgttgctgctgtggccaagttattatggcatgacaggaagttggacaaagct
aggaattggctcaacatggcagtaacgcttgcccccgatattggggatttttgggcttta
tactacaaatttgaacttcagcatggtactgaggagaaccaaaaggatgtattgaacaga
tgcgttgctgcagagccaaagcatggagaaatatggcaacctatttcaaaggccgtggat
aactcccatcaaccaattgaagctatcttaaagaaagttgtggcagcagccgaaaataat
aaacagtag

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