Prunus avium (sweet cherry): 110762181
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Entry
110762181 CDS
T05161
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110762181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavi03009
]
110762181
Enzymes [BR:
pavi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
110762181
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
90S particles
Other 90S particles
110762181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
SPATS2-like
Motif
Other DBs
NCBI-GeneID:
110762181
NCBI-ProteinID:
XP_021820478
UniProt:
A0A6P5T262
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MVRPYAVKGKKRRKREDKYERVEEADEAEEASEPEETEASQPEDVNKGAMVEKQNNGNEG
EEKVGNPIELEGIPITPVELSTKNGPGAIFILERASLEVAKVGKTYQLLNSDDHSNFLRK
NNRDPGLYRPDIVHQALLMVLDSPINKAGKLRNVYVRTAAGVLIEIKPHVRIPRTFKRFC
GVMLQLLQKLSISAVGKREKLMRVIKNPVTQYLPVNSRKIGFSYSSEKLVSIQNYVAAAE
NNRDFVFVVGAMAHGKVETDYTDDFISISGYPLSAAFCISMICQALAGKWDIL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggccatatgcagtgaagggaaagaagcgaaggaagagggaagataaatatgaa
agagtagaagaagcagacgaagcagaagaagcgtcagaaccagaagaaacagaggcttca
cagccagaggacgttaacaagggagctatggttgagaaacagaataatggaaacgaagga
gaagaaaaagtgggtaacccaattgaacttgagggtattccaataaccccggtagaactt
agcaccaagaacggacctggggccatcttcatccttgagagagcttctttggaagttgcc
aaagttggaaagacttatcagctattgaattctgatgatcactcaaatttcttgcggaag
aacaacagagatcctggtctttacaggcccgatatcgttcatcaggctctccttatggtt
ttggatagcccaattaataaagctgggaagttgcgaaatgtgtacgtgagaactgcagca
ggtgttcttattgaaattaagccacatgttcgtatcccaaggacatttaagcggttctgt
ggtgtcatgttgcaactgctacaaaaactgagtatttctgctgttggtaagcgtgagaaa
cttatgcgtgtgataaagaaccccgtgacacagtatttacctgtcaactctcgcaaaata
ggcttctcatacagttcagaaaaattagttagcatacagaattatgttgctgctgctgaa
aacaatagagactttgtttttgtggttggtgcgatggctcatggaaaagtggagacagac
tatactgatgattttatatcaatctctggttaccccttgagtgctgcattttgtatttcg
atgatttgccaagcattggcgggaaagtgggatattttgtga
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