Prunus avium (sweet cherry): 110762421
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Entry
110762421 CDS
T05161
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Module
pavi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110762421
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110762421
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
GGDEF_2
Motif
Other DBs
NCBI-GeneID:
110762421
NCBI-ProteinID:
XP_021820751
UniProt:
A0A6P5T2C2
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MQMFLYPKLLKAQMNSQSHFLSILLIVFLASFSFSFSSNVPEDPLVLDHHHHQTNSSGDH
DEYIKPSPTISRTSRLAILSRASAAHHSASAKHIVVIVDTFGAKGDGGDDTQAFRKAWTK
ACSSQRGVDLVVPKNRNYHLKPNNFSGPCKSPITLKIYGTIKASPNRSDYRNDRRHWIVF
ENVTNFRVEGGGTIDGNGRIWWQNSCKVNEALPCTIAPDAMTFFGCINLQVDNIRFQNPQ
KMHLLFRECVNVKASNLIVTAPEDSPNTDGIHVTGTQNIQIKNCLIRTGDDCISIVSGSR
NVQATDIICGPGHGISIGSLGAGNSEAEVSDVIVSGAKMTDTTNGLRIKTWQGGSGYAYN
IRFKNIMMDNVSNPIIINQYYCDQDEPCQEQASAVKISNVVYDNVKGTSASKVAVKFDCS
KRFGCKGILLRNVNIQTLGEGTAIASCENVRLSHSGSVSPKCSSTI
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgtttttgtatccaaaacttttgaaagctcagatgaattcacaaagccatttt
ctctccatacttctgatagttttcttagcctctttttccttctcttttagcagtaacgtc
ccagaggacccacttgtacttgatcatcatcaccatcaaactaattctagtggtgatcat
gatgaatatataaaaccctcccctacaatatcaaggacaagcaggctagctattctcagc
agagcaagtgctgctcatcattcagcttcagcaaagcatattgttgttattgtggatact
tttggagctaagggagatggcggggatgatacccaggcgtttagaaaagcttggacgaag
gcttgttcttctcaaaggggcgttgatctcgtggttcctaagaacaggaactatcacctg
aaaccaaacaatttctctggtccttgcaaatctcctatcacgctcaagatctatggaaca
atcaaagcctctcccaaccgatcagattacagaaatgacagacggcactggattgtgttt
gaaaatgtgacaaactttagagtcgaaggtggtggcaccatcgatggaaatggaaggata
tggtggcaaaactcttgcaaggttaacgaagcccttccttgcacgatcgcaccagatgcc
atgactttcttcgggtgcatcaacttgcaagtagacaatataaggttccaaaatccccaa
aaaatgcatcttttgtttcgcgaatgtgtgaatgtgaaagcttcgaatctcatagtaaca
gcaccagaggatagccccaacacagatggaattcatgtcacaggaacacaaaatattcag
ataaagaattgtctcattaggacaggggatgattgtatttcaatagtaagtgggtcacga
aatgttcaagccacggatataatctgcggaccaggtcatggaatcagcattggaagctta
ggtgctgggaattcagaagcagaggtttcagatgtgatagtttctggagcgaaaatgacg
gacaccaccaatggactaagaataaagacttggcagggcggttctggatatgcctacaac
atcagattcaaaaatattatgatggacaacgtgagcaatccaataatcataaaccaatat
tactgtgatcaggacgagccatgtcaagaacaggcttcagctgtgaaaataagcaatgtg
gtgtatgataacgtaaaaggcacaagtgcttcaaaagtggcagtgaaatttgactgcagc
aagcgcttcggatgcaaaggaatcttgttacgaaacgttaacatacaaactctaggcgaa
ggaacagccatagcttcctgtgagaatgttagactaagccatagtgggagtgtttctcca
aagtgctcttcaacaatttaa
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