Prunus avium (sweet cherry): 110762608
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Entry
110762608 CDS
T05161
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110762608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110762608
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110762608
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110762608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Cypo_polyhedrin
Motif
Other DBs
NCBI-GeneID:
110762608
NCBI-ProteinID:
XP_021820950
UniProt:
A0A6P5SVT7
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MSILPKGDSIQIREVWNDNLDEEFAIIREIVETYNYVAMDTEFPGVVLRPVGAFKNINDY
NYQTLKDNVDMLKLIQLGLTFSDKNGKLPDLDTQNQYIWQFNFREFNVSEDIFASDSIEL
LRQCGIDFKKNNEKGIDVKRFGELLVSSGVVLNAEVHWVTFHSGYDFGYLLKLLTGLSLP
DSQAGFFELIKAFFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTA
CTFRKLRDTFFGGTAEKYAGVLYGLGVENGQSTN
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattttaccgaaaggggattcgattcaaatccgagaagtgtggaatgataatctt
gatgaagagtttgctataatccgtgagattgttgagacgtataattatgttgctatggac
accgagttccccggcgtggttcttcgcccggtgggggccttcaagaacatcaatgattat
aactaccagaccctgaaagacaatgtcgatatgttgaaattgattcaattgggtctcact
ttctctgacaagaatggtaaacttcccgatctcgatacccagaaccaatacatttggcaa
ttcaatttccgtgagttcaatgtaagcgaagacatcttcgctagcgattcgattgagttg
ctgcgccaatgtgggattgatttcaagaagaacaatgagaagggaattgatgtgaagcgg
tttggtgagcttttggtgtcttcaggggttgtattgaatgctgaagtgcattgggttact
tttcatagtggatatgactttggatacttgcttaagctattgactggtctgagtttgccc
gactcccaagcgggtttctttgaattgatcaaggccttcttcccagtggtgtatgatatc
aagcatttgatgaagttctgcaatagccttcatggtgggttgaacaagcttgcagaattg
ttggaggtggaaagagttggtgtgtgccatcaagcaggctcagacagtttgcttacagct
tgtacgtttaggaaattgagggatacctttttcggtggcacagctgagaaatatgctggt
gtattgtatggtctcggtgttgagaatggacagagtactaattga
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