KEGG   Prunus avium (sweet cherry): 110762657
Entry
110762657         CDS       T05161                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110762657
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pavi03021]
    110762657
Enzymes [BR:pavi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     110762657
Transcription machinery [BR:pavi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     110762657
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 110762657
NCBI-ProteinID: XP_021821012
UniProt: A0A6P5T368
LinkDB
Position
Unknown
AA seq 1200 aa
MGASSDAKGDIGMSSKGESFSDIADMDIDDNGYDDDYDYSISIHDLGQGFLKNFCKEAAI
AFFNEYGLISHQINSYNDFINNGIQRVFDSFGEIIVEPGYDPSKKGESEWRYASVKFGKV
TLGMPSFWGGSDDEKEYKMLPRHARLQNMSYASKMKVNITVEVYTQKLVSSDKFKTGKAQ
YLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKGDCDFDHGGYFIIKGAEKTFIAQEQ
SCLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWI
WFFALGVSSDREVMNLIDYDSEDASISNILFASIRDADKLNDKGDGGFRRGKNAIKYVDE
VIRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMVKSLLQAYAGRRKCDNRDDFRN
KRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFS
TGAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKV
CFLSTPDGENCGLVKNLATTGLVSTNVLESLIPQLLTCGMEKLVDDTFTSLRGKDKVFLN
GDWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKRDVHQGEVRIFSDAGRILRPLLVVENL
NKVKPSKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIKYLFMEDKGKSAAKFTHCELD
MSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTTNPNLRVDTLSHQLHYPQRPL
FQTMTSDCLGKPGLHNRIVPKPEYYNGQNAIVAVNVHLGFNQEDSIVMNRASLERGMFRS
EHIRSYKAEVDNKESLDKRRKPDDCVNFGKMQSKFGRVDSLDDDGFPYVGANLQSGDIII
GRCSESGADHSIKLKHTERGMVQKVLLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQK
GVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYATPF
STLSVDDITDQLHSAGFSRWGNERVYNGATGAMVRSLIFMGPTFYQRLIHMSEDKVKFRN
TGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCK
NVAYVILRTVPGGRKIRGPHCRICDSADDLVRVNVPYGAKLLCQELFSMGISLKFETRFC
NT seq 3603 nt   +upstreamnt  +downstreamnt
atgggggcgtcatcggatgccaagggagatattggtatgagcagcaagggagaaagcttt
tcagatatagctgacatggatattgatgataatggatatgatgatgattacgattattcg
attagcatacatgacctagggcaagggtttctgaagaatttttgtaaggaagctgcaata
gctttcttcaacgaatatggcctcattagtcatcaaatcaactcatacaatgacttcatc
aataatggtatacaaagggtctttgattcttttggtgagattatagttgagcctgggtat
gatccatcaaagaagggagagagtgagtggcgatatgcttctgtgaagtttggcaaggtt
acccttggtatgccaagcttttggggtggttcagatgatgaaaaggagtataaaatgtta
cctaggcatgctcggcttcaaaacatgtcatatgcatccaagatgaaagtgaacattact
gttgaggtatatactcaaaagcttgtgagtagtgataagtttaagactggaaaagcacag
tatcttgataagcaaattctgagtacagacaccagagacattataattggtagtgtccct
gtgatggtgaagtctgacttgtgttggatgaaggacttcgagaaaggagactgtgatttt
gaccatggaggctatttcataatcaagggtgcggagaagacatttattgcacaagaacag
agctgtctgaagagacttcttatcacaaataatcagggattgacagtagcatacaggtca
gaggttaagaggcataggctaataattaggctagtcgggatttccaaattagaaaacatt
gaaggagtagagaaagtccttactgtttatttcatgtcgacggaaatccctgtgtggata
tggttttttgcccttggtgtttcatcagacagagaggtgatgaatctgattgattatgat
agtgaagatgccagcatctcgaacatactctttgcctctattcgcgatgcggataaatta
aatgataaaggagatggggggttccgtagggggaagaatgccatcaaatatgtggatgag
gtgataaggaaaaccgcatttcctcctggggaaagtatggaagaatgcattagcctgtat
ctgttccccaatctgaaaggcctaaagcaaaaggctcgctttcttgggtatatggtaaag
tctctattacaggcctatgctggccgcaggaaatgtgacaatagggatgactttaggaac
aagaggttggacttggctggtgagcttctagagcgagaactcaaggcacatattggacat
gcacggaggcgcatggcaaaggccttgcagagagacctttatggtgatcgtgctgtgcgg
ccgattgagcactatctagatgcttctatagtgactaatggtatttccagagcattctca
accggagcgtggtgtcatcccttcaagaggatggagaggatgtctggtgtagttgcaaca
gttgggcgagcaaatccactgcagacaatggtggatatgaggaagacaaggcagcaggtt
caatatacagggaaggttggagatgccagatacccgcatccttctcactggggtaaggtt
tgctttctctcaaccccggatggtgagaattgtggacttgtaaaaaatttggctaccact
ggactagttagtacaaatgtactggaatctctgataccccaattattaacatgtggcatg
gagaaattggtggatgatacttttacatcactgcgtgggaaggataaagtttttctgaac
ggggactgggttggagtttgtgaagattccctctcatttgttttggaactaaggaggatg
cgtcgcaggaaaaagttgccacatcaggtggaaatcaagagagatgtacaccaaggagaa
gtacgcatattttctgatgctggaaggatcctacgccctctcttggtagttgagaatttg
aataaggttaaaccatccaagggggggaaaagttccttccaatattttcttgacaatgga
ataatcgagctcattggagcggaagaagaagaagattgctctactgcgtggggtattaag
tatctttttatggaagacaagggaaaatcagccgcgaagttcacacactgtgaacttgac
atgtcatttttattaggtttaagctgtggcattatcccatatgcaaatcacgaccacgca
cggagggtcctataccaagcccagaagcactctcaacaagcaattggtttttctaccacc
aatcctaacctcagagtggatactctgtctcaccaactgcactacccccagaggccactc
ttccagacaatgacatctgattgtcttgggaaaccaggactccataacagaattgttcca
aagcctgaatactataatggccagaatgctatcgtggcagtcaatgtccacttaggattt
aaccaagaggatagcatagtaatgaaccgggcatcattggaacgtggtatgttccgatct
gaacacataagaagttacaaggctgaggttgacaacaaggagtctctggacaaaaggcgg
aagcctgatgattgtgtcaattttggaaagatgcaaagtaaatttggacgtgttgacagc
cttgatgatgatggttttccatatgttggtgcaaatttgcagagtggtgatattataatt
gggaggtgcagtgaatcaggagctgatcatagcatcaaactgaagcacactgaaagggga
atggttcagaaagttctactttcttctaatgatgatggaaagaattttgctgttgtatct
ctaagacaggttcgttctccatgccttggagacaagttctcaagcatgcatggacaaaaa
ggtgtcctggggtttctggagtcccaagagaacttccctttcacaatacagggggtggtt
ccagatattgtaattaatccacatgcatttccttcacgacaaactcctggtcaactccta
gaggctgctttggggaagggaattgcctgtggtggttcaaagagatatgcaacgcctttc
tctactctctctgttgatgacatcacagaccaactgcatagcgctggattttcaagatgg
ggaaatgagagagtatacaatggtgcaactggtgcaatggttcgttccctgatatttatg
ggcccaacattttaccagcgcttgattcacatgtctgaagataaagtaaagtttcggaac
actgggccagtccatcctttgacccgacagccagtggcagatcggaagcgatttggtggg
atcaagtttggtgagatggaacgtgactgccttatagcccatggagcttcagcaaattta
catgaacgcctcttcactctcagtgactcctcccaaatgcatgtttgccagaaatgcaaa
aatgtggcttatgtgatcctacgaacagtccctggtggccgtaagatcaggggtcctcat
tgccggatttgtgactctgctgatgaccttgttcgggttaatgtaccatatggagcaaag
ctattgtgccaggagctttttagcatgggcataagcttaaagttcgagacccggttttgt
tga

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