Prunus avium (sweet cherry): 110762693
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Entry
110762693 CDS
T05161
Name
(RefSeq) LOW QUALITY PROTEIN: protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03440
Homologous recombination
pavi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110762693
03460 Fanconi anemia pathway
110762693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pavi04121
]
110762693
03036 Chromosome and associated proteins [BR:
pavi03036
]
110762693
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110762693
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110762693
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
110762693
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
110762693
FA (Fanconi anemia) pathway
Downstream FA components
110762693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Motif
Other DBs
NCBI-GeneID:
110762693
NCBI-ProteinID:
XP_021821056
UniProt:
A0A6P5T2U9
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MSTWQMFADAGNNYRWYPDHQPAPFILLLHTPNGAVYPTATTTHHSDSERQQQLKSSSRL
PSMADLLLQGCSKLAEAQTQNQRNGVDVDDGVGMFRNGFGRPVAIKPSSLAKASSLLQTG
TGQVQATNSRGGFSNSLFQTGSGKMVNISPDGLVRAKTLLGLGDDNDHSKLPGFDSGGEV
MDAASISRSPLINKTVSVQTRCKKNEADLNFMSPERLNLTPDKPSSIKFHTAGGRSISVS
TDALQRARSLLGDPELGSFLNEGDAGDSVFSFSKGRGHDERTPFSHQKMTRKNFLTKTSV
SPLQSSSNQVRSSSAINSGTNLITQFDVVRSESVCKSNSELTYRQEKPLSDKPCILKTVE
NNYLENGGSLRINPVGKSLAKPLVDISNTVGTTAMNSTQMSGVKRRLGRSSISPFKKPRT
SNSSTPLHKNVPLVRNGLSTLSSDHSCSKRRVSTRYPFSVTRMYVKKYFGMPPPDQNMLE
CLSDPMRRITASNAEKYMFLDESGLNCIGAEAFDHMLARSGALMQYTSREWVTNHYKWVV
WKLACYERCHLAKSFGNFLTVSNVLEELKYRYEREVNQGHRSAIKRILEGDASPSSMVVL
CISAIHSNCDPNMETSSRAENSGAAKVELTDGWYSVDAVLDALLSKQLASGKLFVGQKLR
IWGAALCGWAGPVSPLEVARTVTFRLHINGTYRAHWADRLGFCKVVGAPLAFNCVKSGGG
AVPCTLLGVTRIYPVLYKERLSNGRSIVRSERLESQMVQSYQERRSNVIEGIISEFQRGL
EHSHLCNDSDSEGAKLLKILETATEPEILMAEMSSEQLKSFTKYRSKLEAIKQSDMEKSI
LKALEDVGLSEREVTPFMRVRVVGLTRKLCHGKDSSKEGLITIWNPSEKQQKTELVEGHA
YRVSGLIPTSSDVDTLHLLARGSTTTWQPLSQQAVEHFKPFFNPRKSVLLSDLGKVPLSS
EFDIAAFIVFVGEAYIAAHQKKQWVFVTDGSISELNSEESCDSLLAVCFCSPYIGVDSIA
PINYNLTGSTVGFCNLTKREKDQMNSLWVAEATETSAYFLSFDTPRCSHLKDAAVSTERW
GRISSLTINRLKERVLCITGASEG
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagatgttcgccgacgccggcaacaattaccggtggtatcccgaccac
caaccggcgccgtttatcctactgctacacacaccaaacggcgccgtttatcctactgct
actactactcatcatagtgatagtgaaaggcagcagcagctcaagtcgagcagtcggctg
ccttccatggcggatctgctgcttcaaggttgttcgaagcttgcagaggcccagactcag
aatcagagaaatggcgttgatgttgatgacggtgttgggatgttccgcaacggatttgga
agacccgtcgccatcaagccatcctccttagccaaagcatcgtcgcttcttcaaactgga
actggccaagtgcaagctacgaatagtagaggtggtttctctaattcccttttccagact
ggctctgggaaaatggttaatatatctccggacggtcttgtgagggcaaagacattgctt
ggtttgggagacgacaatgatcacagcaagcttccgggtttcgacagtggtggggaggtt
atggatgctgcatccatttcaaggtctccgttaattaataagactgtttcagtacaaact
agatgtaagaagaatgaggctgatctaaattttatgtcacctgaaaggcttaatttaact
ccggacaaaccttcatcaatcaagttccatacagctggaggaagatctatatctgtttct
actgatgcactgcaacgtgcaaggagtctacttggtgacccagagttagggagtttcttg
aatgagggggatgcaggtgactccgttttctcattttcaaaaggtagaggacatgatgaa
cgcactcccttctcccatcagaaaatgactaggaaaaactttttaactaagacttctgta
tctccactgcaatcatcctctaatcaagtgcggtcgtcgtcggctataaattccggcact
aatctgattactcaatttgatgttgttaggagtgaaagtgtctgtaagtcaaacagcgag
ttaacttatcggcaggagaagccccttagcgacaaaccttgtatcctcaagacagtagaa
aacaattatttggaaaatggtggtagtttgaggattaatcctgttggaaagtcactagcc
aagccattggttgatatttcaaataccgttggcaccactgctatgaatagcacacaaatg
agtggtgtaaagaggaggcttggaagaagttctatttctccattcaagaagcctcgcact
tccaactcctccactccattgcataagaatgttcctcttgtccgtaatggtttgtctact
ttgtcctccgaccattcatgttccaaaagaagggtttctactagatatcctttctcagta
actagaatgtatgtgaagaaatattttggaatgccaccacctgaccagaacatgttggag
tgtttgtcagacccgatgagaagaattacagcaagtaacgcagaaaagtacatgtttctt
gatgaatctggcttaaactgcataggagcagaagcttttgaccacatgttggctcgttct
ggagctttaatgcaatatacttccagagagtgggtcacaaatcactacaagtgggttgtc
tggaaactggcttgctatgagagatgtcatctagctaagtcgttcggaaattttttgaca
gtctccaatgtgcttgaggaattgaagtatagatatgaaagagaagtgaatcaaggtcac
cgatctgcaattaagaggattctggaaggagatgcatccccttcttcaatggtggttcta
tgcatttcagctattcattcaaattgtgacccaaatatggagactagctccagagctgaa
aatagtggtgctgcaaaagttgagcttactgatgggtggtattcagtggatgctgtactg
gatgcactcctgtcaaagcagcttgctagtggaaaattatttgttggacagaaacttcgg
atctggggagcagcactctgtggttgggctgggcctgtttcaccccttgaggtggcaaga
acagttactttccggctgcacataaatggaacatatagagctcattgggctgatcgattg
ggattttgtaaagttgttggtgctcccttagcatttaactgtgtcaagagtggtggtggt
gcagtcccttgcactcttctaggagtcacacggatataccctgttctctacaaagagagg
ttaagtaatggaagatctattgtaagatcagagaggttggagtcccaaatggtgcaatca
tatcaagagaggcgctctaatgtcatagaaggcattatatctgagttccaaagaggacta
gaacattcacatttgtgtaatgatagcgatagtgaaggggcaaaactcttaaagatacta
gaaacagccactgaacccgaaattttaatggcagaaatgagttcagaacagttgaaatct
tttaccaaatatcgatcaaagctggaggcaattaagcagtcagacatggagaaatcaatt
ttgaaagcactggaagatgtcggcttaagtgagagggaagtcacgccattcatgagggtg
agggtggttggactaacaagaaaattatgtcatgggaaagacagttctaaggaaggccta
ataacaatctggaacccatctgagaagcagcagaagactgagctggttgagggacatgca
tatcgcgtttctggacttataccaacaagttctgatgtggatactctacacttgctagcg
agaggatccacaacaacatggcagcctttatctcagcaggcagtcgaacactttaagcct
tttttcaatcctcgcaaatcagtcttattgtcagatttgggtaaagttcctctttccagt
gaatttgatattgctgcattcattgtgtttgtgggggaggcatatatagctgctcaccag
aagaaacagtgggtgtttgtgacagatggctccatatctgaattaaattcagaagaatca
tgtgattctctactggccgtctgcttctgttcaccatacattggcgttgattcaattgct
cctataaactataacctcacaggatcaacggttgggttttgtaatcttaccaagagagaa
aaggaccaaatgaattccctttgggtagcagaagctacagaaacttcagcttacttttta
agttttgacactccacgttgttctcatctcaaagatgctgctgtctccactgaaagatgg
ggaaggatctctagcttgactatcaataggcttaaggagagggttctgtgtattactggt
gctagcgaaggatag
DBGET
integrated database retrieval system
