Prunus avium (sweet cherry): 110762702
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Entry
110762702 CDS
T05161
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110762702
Spliceosome [BR:
pavi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
110762702
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
zf-RING_2
Lactamase_B
zf-RING_11
zf-rbx1
Anti-Pycsar_Apyc1
zf-C3HC4_2
zf-C3HC4
Lactamase_B_2
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
FANCL_C
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
110762702
NCBI-ProteinID:
XP_021821066
UniProt:
A0A6P5T2V6
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MAIESLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGHLDHQRYPDFSLIPKPEPDPNFD
HALTCIIITHFHLDHVGALPYFTEVCGYRGPIYMTYPTKALAPIMLEDYRKVMVERRGEE
EQFSSDHIAECMKKVIPVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGD
YNMTPDRHLGAAQIERLNLDLLISESTYGTTIRDSKYAREREFLRAVHKCVAGGGKVLIP
TFALGRAQELCILLEDYWERMNLKVPIYFSAGLTLQANMYYKMLISWTSQKVKETYSTRN
AFDFKNAHKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKHWAPSEMNLVTLPGYCVAGT
IGHKLMSGKPTKIDLDKDTQIDVRCQIHHLSFSPHTDAKGIMDLIKFLSPKNVILVHGEK
PKMATLKGKIQSELGIQCYDPANNETVSISSTHYVKALASDAFIRSCLNPNFKFSKSSQE
DEHGSNSRNNNSTPRLRVSDERVAEGVLVMERNKKAKVVHQDELLLMLGEKKHQVQFAYC
CPVDIGNSGETKSSTTNDESSTLSLSHNHVSISLSIIIGNSIASFSHNFVTNMSSESSAT
TAAAAESHAPLLLPRQASSGRDSSDLGSPTARPATLAMLLGRATGRRGPSMLVRETAARE
LDERRADWGYSKPVVALDMMWNTAFVVVSVAMLIWTEHEHPNTPIRLWICGYALQCFVHV
VLVWVEYQRRNNIARRISRRNQDAQQNQHQVEIDANDTDDEEAEAAARDLAISTRSSLSK
RCETVNTMASFLWWIVGFYWVVSGGEVLLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLI
GVALCCCLPCIIAILYAVAGQEGASEADLSILPKYKFRSSSEEKSSVGAGKMIPVETSSG
YLAIERILLPEDAECCICLSPYEDGTELHTLPCNHHFHATCIVKWLKMNATCPLCKYNIL
KGNEPV
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgagtctctcgtcctcggcgctgggcaagaggtaggtaagagctgtgtagtg
gtgacaatcaatgggaagcgaatcatgttcgactgcggaatgcatatggggcatctagac
caccaacgctaccccgacttctctctcattcctaaacctgaacccgacccgaacttcgat
cacgccctcacttgcatcatcatcacccactttcacttggatcacgttggagccctccct
tatttcacggaagtctgcggttatcgtggccccatttacatgacgtatccgacaaaggca
ttggctcctataatgttagaggactatcgaaaagtgatggttgagcgaaggggtgaggaa
gaacagttttcttctgatcacattgccgaatgcatgaagaaagttataccagtggatctg
aagcaaacagtgcaggttgataaagaccttcaaatccgtgcgtactatgcaggacatgtt
cttggagctgcaatgttttatgcaaaggtgggagacgctgctatggtatacacaggagac
tataatatgacaccagataggcatcttggagcagctcaaattgaacgactaaatttggac
cttcttatttcagagtccacatatggaacaaccatccgggattcaaaatatgcccgggaa
agagaatttctcagagctgttcacaaatgcgtcgctggtggtggaaaagtgctaattcca
acatttgcccttgggagagctcaggaactctgtatcttgctggaagattattgggagcgc
atgaatctaaaggttcctatttacttctcagcaggtttgacccttcaagccaatatgtac
tataagatgcttatcagttggaccagccagaaagttaaagaaacgtactccacacgcaat
gcatttgattttaaaaatgctcacaagtttgaccgttctatgatcgatgctcctggacct
tgtgttctgtttgccacaccagggatgatcagtggtggtttttcacttgaagttttcaag
cactgggctccttcggaaatgaatcttgttacactgcccgggtattgcgtggctggaact
ataggacataaattgatgtcgggtaaacccaccaaaattgatctggacaaggacacgcaa
attgatgtgcgatgccagattcatcatctgtctttcagtcctcatacagatgccaaaggg
attatggaccttatcaaatttctctcccccaagaacgtgatacttgttcatggcgagaag
cctaaaatggctactctaaaaggaaaaatacagtccgaactgggaattcaatgttatgac
cctgcaaacaatgagactgtctcaatttcttcaacccactatgtgaaggcattagcttcg
gacgcatttatccgaagctgcttaaatccaaacttcaagttttcgaaaagcagccaagaa
gatgaacacggttcaaattcgaggaacaataattccactccgcgactgcgagtaagtgat
gagagggtagcagaaggggtcttggttatggaaagaaacaaaaaagccaaggtagtacac
caagacgagcttctgctcatgttaggagaaaagaagcaccaagttcaatttgcttattgc
tgccctgttgatattggcaactcgggagagaccaaaagttccacaacaaatgatgagtcg
agcactctctctctctctcacaatcatgtctctatttctctctcaattataattggcaat
tcaattgcctctttttctcataatttcgtcacaaacatgtcctcggaatcttcggctacg
acggcggcagcggctgagtcccatgcgccgctcctccttccccgccaggcgagcagtggc
cgcgactcctccgacctcggctccccgaccgcccgacccgccacgctggcgatgctgctg
gggcgggccaccgggcgccgtggcccctcgatgctggtgcgggagacggcggcgagggaa
ctggacgagcggcgcgccgactggggctactccaagccggtggtggctctggacatgatg
tggaacacggccttcgtggtggtgtcggtggcgatgctgatatggacagaacatgagcac
ccaaacacgccgatccggctgtggatctgtggatatgcgctgcagtgtttcgtgcatgtg
gtgttggtgtgggttgagtaccagagaaggaataatattgctcggaggatcagtagaaga
aaccaggacgcccagcagaaccagcaccaggtcgaaatcgatgcaaatgataccgacgat
gaagaagcagaagcagcagctagggatttggcgatttccactcgctccagtctctctaaa
cgatgcgaaacagtgaatacaatggcatcatttctctggtggatagttggcttttattgg
gtagtctctggcggtgaagttcttctgcaaaatgctccacgtttgtactggttggctgtg
gtttttctggcatttgatgtcttctttgccatcttttgtgttgttctggcatgtttgatt
ggagttgctctttgttgctgtttgccatgcatcattgcaattctttatgcggttgctgga
caggaaggtgcatctgaagcagatctcagtattcttccaaaatacaaatttcgatcgagc
agtgaggaaaaatctagtgttggagcagggaaaatgattccagtagaaacaagcagtggg
tacctagcaattgagcgtatacttttacctgaggacgcggaatgttgtatatgtctcagc
ccctatgaggatggtacagagcttcacactcttccctgtaatcatcatttccacgctact
tgcattgtgaaatggcttaaaatgaatgcaacatgtcctctctgcaagtacaacattctc
aagggaaatgaaccggtttga
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integrated database retrieval system
